Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIR620-201ENST00000385232 95 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 TCEA1P2-201ENST00000420496 906 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC093698.1-201ENST00000423843 571 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC009965.2-201ENST00000425328 970 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AL050321.1-201ENST00000432363 400 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 KCTD9P3-201ENST00000434597 1169 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 RPL7P28-201ENST00000437739 740 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC092170.1-201ENST00000440211 356 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AL050341.1-201ENST00000447743 313 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 DNAJC19P8-201ENST00000452887 259 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 MTATP6P14-201ENST00000455189 673 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 FCF1P6-201ENST00000456841 595 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC026726.1-201ENST00000512859 601 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC010374.2-201ENST00000512933 535 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC087894.1-201ENST00000538359 518 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC017076.1-201ENST00000607613 578 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AL391834.2-201ENST00000609982 546 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AP003476.1-201ENST00000623984 516 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC004777.1-201ENST00000624317 287 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC009093.8-201ENST00000641769 292 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC009229.4-201ENST00000623854 1947 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 RNU5B-1-201ENST00000363286 116 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 MIR1183-201ENST00000408856 89 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC241520.1-201ENST00000422654 1099 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AL354692.1-201ENST00000423044 315 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC096638.2-201ENST00000434965 711 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 ARF4P4-201ENST00000439608 520 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 OR51B8P-201ENST00000449892 769 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 IFNWP4-201ENST00000453148 294 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC008280.2-201ENST00000455473 307 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC006511.1-201ENST00000470614 315 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC104619.4-201ENST00000510773 249 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC008494.2-201ENST00000514544 370 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 MTATP6P9-201ENST00000515039 680 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 COX6B1P6-201ENST00000522347 255 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 OR8I1P-201ENST00000529291 931 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC107016.1-201ENST00000550463 337 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC007424.1-203ENST00000554613 687 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 VN1R84P-201ENST00000593697 235 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC099785.1-201ENST00000605697 437 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AP002802.2-201ENST00000605877 235 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AL512427.1-201ENST00000618593 349 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC233309.1-201ENST00000619522 751 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AP003072.4-201ENST00000624580 310 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AL356118.1-201ENST00000635272 1078 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AL590396.2-201ENST00000636511 1041 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 AL645568.2-201ENST00000432815 1337 ntBASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
NEDD8-MDP1E9PL57 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC018555.1-201ENST00000567548 1980 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 RNU6-1339P-201ENST00000363574 91 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 AC234772.1-201ENST00000377927 937 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 MIR7-3-201ENST00000384898 110 ntBASIC3.87□□□□□ -1.79
NEDD8-MDP1E9PL57 JKAMPP1-201ENST00000413804 919 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms