Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 HMGB3P13-201ENST00000511263 607 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC117532.1-201ENST00000514638 323 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 RFPL4AP5-201ENST00000514977 504 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC069240.1-201ENST00000548774 375 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 EIF5A2P1-201ENST00000564027 460 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AL590229.1-201ENST00000603497 542 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 MIR432-201ENST00000606207 94 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 OR2AS2P-201ENST00000606902 342 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC092650.2-201ENST00000619984 902 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC091931.1-201ENST00000623488 728 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AF246928.1-201ENST00000623768 87 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 MAPK10-263ENST00000641052 4307 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC068254.2-201ENST00000623938 3577 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 MIR331-201ENST00000362302 94 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 Y_RNA.318-201ENST00000365131 97 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AL021407.1-201ENST00000404531 386 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC016907.1-201ENST00000419483 435 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 USP9YP9-201ENST00000429406 715 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC073587.1-201ENST00000447093 876 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 RPL7P1-201ENST00000468161 747 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 RPL7P9-201ENST00000468715 747 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 RAP1BP2-201ENST00000478270 544 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 NCOR1P1-202ENST00000486162 291 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 FTH1P24-201ENST00000503502 462 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC006499.6-201ENST00000511169 607 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC007954.1-201ENST00000554198 494 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC093765.1-201ENST00000603758 881 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC135507.1-201ENST00000607214 561 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC064801.1-201ENST00000612025 407 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AL021997.2-201ENST00000615674 271 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 PCMTD1P7-201ENST00000634506 357 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AL451142.2-201ENST00000429076 2090 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 Z95327.2-201ENST00000414579 1873 ntBASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.39□□□□□ -1.71
TCRBV7S3A2A0A539 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 DHX40P1-201ENST00000588725 1412 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL592182.3-201ENST00000642132 3304 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 Y_RNA.77-201ENST00000362962 107 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 Y_RNA.201-201ENST00000364052 96 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 MIR323B-201ENST00000385269 82 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AL160275.2-201ENST00000412010 394 ntBASIC4.38□□□□□ -1.71
TCRBV7S3A2A0A539 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms