Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 AC021755.1-201ENST00000559747 1447 ntBASIC3.26□□□□□ -1.89
KCNIP3Q9Y2W7 MTND5P31-201ENST00000419366 1374 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 RNU6-619P-201ENST00000365146 108 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 RNU6-1226P-201ENST00000384317 107 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC009237.2-201ENST00000421358 284 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC244098.2-201ENST00000422068 99 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 RPP40P1-201ENST00000426762 456 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 NPM1P49-201ENST00000448027 714 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 CYCSP53-201ENST00000455540 265 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 RN7SL860P-201ENST00000473738 223 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC007688.1-201ENST00000475592 759 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 RN7SL826P-201ENST00000479724 288 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC010476.1-201ENST00000519111 851 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 OR4A12P-201ENST00000530847 918 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AP004242.1-201ENST00000533701 349 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 OR8K4P-201ENST00000534608 872 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC091516.1-201ENST00000549191 703 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AL845331.3-202ENST00000562856 261 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 ZNF192P1-203ENST00000565888 810 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 MTCO1P40-201ENST00000574371 625 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AP005229.2-201ENST00000609980 697 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AL590396.4-201ENST00000636779 956 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 RARSP1-201ENST00000542842 1418 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 SGO1P1-201ENST00000603525 1447 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 ZNF37BP-203ENST00000452306 1352 ntBASIC3.25□□□□□ -1.89
KCNIP3Q9Y2W7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 SNORA31-201ENST00000362607 130 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 RNU6-468P-201ENST00000384003 109 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 SSXP10-201ENST00000402595 565 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 LIPT1P1-201ENST00000415870 1186 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 RPL21P109-201ENST00000422213 475 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC233981.1-201ENST00000423224 461 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 RPS29P17-201ENST00000430795 166 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 COX6B1P7-201ENST00000430845 235 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 HMGN3P1-201ENST00000453847 193 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 RNU7-140P-201ENST00000459546 60 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 NAP1L1P3-201ENST00000462291 880 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 RN7SL629P-201ENST00000489622 285 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 TRBV12-2-201ENST00000489763 344 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms