Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AP003033.1-201ENST00000527244 415 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AP000790.1-201ENST00000528891 737 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC005951.1-201ENST00000576706 485 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AP001521.2-201ENST00000608772 546 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC090425.2-201ENST00000608818 501 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC009237.17-201ENST00000618111 748 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AL031667.3-201ENST00000620124 655 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AL133243.3-201ENST00000617415 3004 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 AC025125.1-201ENST00000624743 1922 ntBASIC4.62□□□□□ -1.67
VPS4AQ9UN37 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4AQ9UN37 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC008758.3-201ENST00000507003 1829 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 RNA5SP28-201ENST00000363841 119 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 CYCSP45-201ENST00000402289 315 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AL078604.1-201ENST00000404609 466 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 U3.35-201ENST00000408405 208 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 NPM1P11-201ENST00000417106 855 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 E2F6P2-201ENST00000420708 748 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC062016.2-201ENST00000420950 676 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC096638.2-201ENST00000434965 711 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 RHOT1P3-201ENST00000436571 331 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC004938.1-201ENST00000438468 308 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 RPL34P20-201ENST00000442771 351 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 SLC31A1P1-201ENST00000451221 567 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 RPL18AP17-201ENST00000455326 198 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC109486.1-201ENST00000486833 374 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC011005.3-201ENST00000491624 395 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 HMGB1P28-201ENST00000507778 552 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 ARL2BPP5-201ENST00000523141 481 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 RFPL1S-203ENST00000539579 330 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC087477.6-201ENST00000559595 843 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 BNIP3P33-201ENST00000598912 569 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AF131215.7-201ENST00000602443 707 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC020910.2-201ENST00000603635 610 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 SNORD91B-202ENST00000608459 222 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC024560.3-201ENST00000608482 349 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 HULC.1-201ENST00000612720 240 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AL133243.1-201ENST00000614487 366 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 AC099063.3-201ENST00000642066 185 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 ASNSP1-201ENST00000518311 1939 ntBASIC4.61□□□□□ -1.67
VPS4AQ9UN37 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4AQ9UN37 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms