Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 EIF1P6-201ENST00000600054 334 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AL451044.1-201ENST00000604867 238 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AL592148.2-201ENST00000612210 372 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AP003399.1-201ENST00000637534 361 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 MTCO1P6-201ENST00000481192 1384 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC104454.1-201ENST00000421341 1401 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 IQCB2P-201ENST00000401788 1633 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 RNF6P1-201ENST00000444889 1784 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC009229.4-201ENST00000623854 1947 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SIX4Q9UIU6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SIX4Q9UIU6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SIX4Q9UIU6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.34□□□□□ -1.72
SIX4Q9UIU6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 RNA5SP52-201ENST00000362448 134 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 SNORA11C-201ENST00000408532 129 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 RNU6-77P-201ENST00000410554 91 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 RNU6-575P-201ENST00000411326 105 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC114814.2-201ENST00000419195 485 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 COX7BP2-201ENST00000437976 242 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AL008629.1-201ENST00000438615 184 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 CCDC75P1-201ENST00000469247 791 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC017037.1-201ENST00000508460 471 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 RNU6-416P-201ENST00000516265 103 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 RNU5A-4P-201ENST00000516588 111 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 OR8R1P-201ENST00000543943 764 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC092747.2-201ENST00000545069 983 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC084824.1-201ENST00000550917 1005 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC022968.1-201ENST00000567372 442 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AL354943.1-201ENST00000572103 781 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC021749.1-201ENST00000604322 607 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AL133507.1-201ENST00000605269 557 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AL353600.1-201ENST00000608148 251 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC107075.1-201ENST00000613695 314 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AC131159.1-201ENST00000621854 213 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AL596275.2-204ENST00000641628 552 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 AL596275.2-206ENST00000641957 626 ntBASIC4.33□□□□□ -1.72
SIX4Q9UIU6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX4Q9UIU6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 FAM133CP-201ENST00000332869 704 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 RNU6-707P-201ENST00000364647 95 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 OR1L1-202ENST00000373686 1083 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 MIR1193-201ENST00000408109 78 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 RN7SKP263-201ENST00000411194 309 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 MTND4P22-201ENST00000413116 1169 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 AC009518.2-201ENST00000418056 731 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX4Q9UIU6 RPL12P46-201ENST00000436610 195 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 AC007327.1-201ENST00000447461 264 ntBASIC4.32□□□□□ -1.72
SIX4Q9UIU6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms