Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 PTMAP5-201ENST00000393073 333 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 MOB1AP1-201ENST00000430903 535 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC023347.2-201ENST00000433994 462 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC245517.2-201ENST00000442890 346 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 HMGB3P8-201ENST00000449709 577 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC026427.2-201ENST00000506228 536 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 ZNF92P3-201ENST00000596594 954 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC006946.3-201ENST00000609791 756 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AC006065.5-201ENST00000623427 349 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 AL079305.1-201ENST00000623159 3008 ntBASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.35□□□□□ -1.71
CTNNA3Q9UI47 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 SNORA5A-201ENST00000384111 134 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AC234782.4-201ENST00000417646 1048 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AL356806.1-201ENST00000422524 916 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AL138799.3-201ENST00000438968 350 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 RPS3AP46-201ENST00000448352 682 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 RPL37P6-202ENST00000464216 403 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AC026784.1-201ENST00000507986 352 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 RNU2-58P-201ENST00000516403 183 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 RANP9-201ENST00000519957 271 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 IGKV2-36-201ENST00000519999 223 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AP000926.4-201ENST00000527351 454 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 CYP2C60P-201ENST00000566088 139 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AC006270.2-201ENST00000578523 652 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AC243756.2-201ENST00000618406 463 ntBASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA3Q9UI47 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTNNA3Q9UI47 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTNNA3Q9UI47 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTNNA3Q9UI47 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 MTND5P1-201ENST00000445440 1375 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 MTND4P31-201ENST00000425607 1343 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 HNRNPDP2-201ENST00000406475 478 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AL035423.1-201ENST00000420331 213 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC006989.1-201ENST00000427212 131 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 RAD1P2-201ENST00000446414 663 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 ANP32BP2-201ENST00000454525 545 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC092451.1-201ENST00000480211 153 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 RN7SKP234-201ENST00000517173 224 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 OR4C2P-201ENST00000530855 1064 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC023161.2-201ENST00000551218 780 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 AC092354.2-201ENST00000607786 514 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 RMST_8.1-201ENST00000610287 165 ntBASIC4.33□□□□□ -1.72
CTNNA3Q9UI47 U6.48-201ENST00000618523 106 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms