Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 LAP3P1-201ENST00000403648 294 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 RPL7P8-201ENST00000411964 730 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 RPL7P59-201ENST00000447700 943 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 AC015871.2-201ENST00000603605 948 ntBASIC4.02□□□□□ -1.77
SCN11AQ9UI33 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN11AQ9UI33 AC108206.1-201ENST00000570186 4159 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN11AQ9UI33 AL132656.3-201ENST00000606384 1595 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 AL451142.2-201ENST00000429076 2090 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN11AQ9UI33 ZNF826P-207ENST00000622273 1910 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN11AQ9UI33 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCN11AQ9UI33 FTLP6-201ENST00000355274 422 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 ARF4P3-201ENST00000397387 509 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 RN7SKP220-201ENST00000410611 288 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 RANP4-201ENST00000413361 655 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 AC112492.1-201ENST00000449607 712 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 Y_RNA.638-201ENST00000459374 113 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 PRELID3BP8-201ENST00000604148 295 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 AL365400.2-201ENST00000605604 902 ntBASIC4.01□□□□□ -1.77
SCN11AQ9UI33 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN11AQ9UI33 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.01□□□□□ -1.77
SCN11AQ9UI33 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
SCN11AQ9UI33 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN11AQ9UI33 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4□□□□□ -1.77
SCN11AQ9UI33 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4□□□□□ -1.77
SCN11AQ9UI33 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SCN11AQ9UI33 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCN11AQ9UI33 OR52B1P-201ENST00000316506 909 ntBASIC4□□□□□ -1.77
SCN11AQ9UI33 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4□□□□□ -1.77
SCN11AQ9UI33 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4□□□□□ -1.77
SCN11AQ9UI33 SNORA18.3-201ENST00000384122 132 ntBASIC4□□□□□ -1.77
SCN11AQ9UI33 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4□□□□□ -1.77
SCN11AQ9UI33 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4□□□□□ -1.77
SCN11AQ9UI33 AC069540.1-201ENST00000446320 988 ntBASIC4□□□□□ -1.77
SCN11AQ9UI33 ELOCP23-201ENST00000452014 332 ntBASIC4□□□□□ -1.77
SCN11AQ9UI33 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4□□□□□ -1.77
SCN11AQ9UI33 FGF7P3-201ENST00000454645 303 ntBASIC4□□□□□ -1.77
SCN11AQ9UI33 RPS4XP22-201ENST00000480755 780 ntBASIC4□□□□□ -1.77
SCN11AQ9UI33 AC010306.1-201ENST00000523223 1117 ntBASIC4□□□□□ -1.77
SCN11AQ9UI33 AC022080.3-201ENST00000544433 482 ntBASIC4□□□□□ -1.77
SCN11AQ9UI33 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCN11AQ9UI33 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4□□□□□ -1.77
SCN11AQ9UI33 AL158196.1-201ENST00000616786 434 ntBASIC4□□□□□ -1.77
SCN11AQ9UI33 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4□□□□□ -1.77
SCN11AQ9UI33 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4□□□□□ -1.77
SCN11AQ9UI33 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SCN11AQ9UI33 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCN11AQ9UI33 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN11AQ9UI33 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 RPS6P4-201ENST00000494693 758 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 RN7SKP132-201ENST00000516001 208 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 AC099506.2-201ENST00000623074 221 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 AC116096.1-201ENST00000566804 2314 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 SNORA68.2-201ENST00000391263 128 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 RPS24P13-201ENST00000442520 397 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 AL135938.1-201ENST00000443141 297 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 AC016696.1-201ENST00000446949 318 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 AC239809.1-201ENST00000450470 217 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 HMGB1P5-202ENST00000451497 985 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 RNA5SP217-201ENST00000515959 91 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 GTF3AP2-201ENST00000557014 266 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 MIR4425-201ENST00000580572 84 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 CYCSP41-201ENST00000616920 296 ntBASIC3.99□□□□□ -1.77
SCN11AQ9UI33 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN11AQ9UI33 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 AC027287.1-201ENST00000553115 1453 ntBASIC3.98□□□□□ -1.77
SCN11AQ9UI33 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 RPL7P25-201ENST00000404151 721 ntBASIC3.98□□□□□ -1.77
SCN11AQ9UI33 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 AL121890.1-201ENST00000435457 205 ntBASIC3.98□□□□□ -1.77
SCN11AQ9UI33 RPL32P28-201ENST00000443577 397 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms