Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC068137.4-201ENST00000638485 296 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 ZNF37BP-203ENST00000452306 1352 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 MTND4P34-201ENST00000572715 1371 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 Z95331.1-201ENST00000623075 23112 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL20A1Q9P218 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL20A1Q9P218 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL20A1Q9P218 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL20A1Q9P218 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL20A1Q9P218 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL20A1Q9P218 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 A2MP1-204ENST00000566278 4130 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 RNA5SP28-201ENST00000363841 119 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 SNORA4.1-201ENST00000364263 144 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 DSTNP4-201ENST00000399472 474 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AL078604.1-201ENST00000404609 466 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC068533.2-201ENST00000411872 306 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 AL035407.1-201ENST00000429211 571 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 OR4C10P-201ENST00000434991 931 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 RPS26P2-201ENST00000440331 348 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 MTND2P20-201ENST00000440805 661 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC097262.1-201ENST00000452559 548 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 RPL35AP15-201ENST00000468042 339 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC104685.1-201ENST00000502445 371 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 FTH1P24-201ENST00000503502 462 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 HMGB1P28-201ENST00000507778 552 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 RNA5SP49-201ENST00000516450 115 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 EIF5A2P1-201ENST00000564027 460 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AL512347.1-201ENST00000566420 503 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 NBR2-204ENST00000587322 63 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 VN1R90P-201ENST00000595717 726 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC015726.1-201ENST00000602353 681 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 AP000811.1-201ENST00000603803 651 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC091905.2-201ENST00000623143 306 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL20A1Q9P218 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL20A1Q9P218 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL20A1Q9P218 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL20A1Q9P218 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 ELL2P3-201ENST00000457883 1602 ntBASIC4.97□□□□□ -1.61
COL20A1Q9P218 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COL20A1Q9P218 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL20A1Q9P218 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
COL20A1Q9P218 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL20A1Q9P218 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
COL20A1Q9P218 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL20A1Q9P218 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL20A1Q9P218 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
COL20A1Q9P218 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.96□□□□□ -1.62
COL20A1Q9P218 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL20A1Q9P218 LARP1BP1-201ENST00000506036 1359 ntBASIC4.96□□□□□ -1.62
COL20A1Q9P218 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL20A1Q9P218 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
COL20A1Q9P218 SNORD116-9-201ENST00000384000 95 ntBASIC4.96□□□□□ -1.62
COL20A1Q9P218 SNORD116-3-201ENST00000384287 95 ntBASIC4.96□□□□□ -1.62
COL20A1Q9P218 SNORD116-7-201ENST00000384404 95 ntBASIC4.96□□□□□ -1.62
COL20A1Q9P218 SNORD116-5-201ENST00000384462 95 ntBASIC4.96□□□□□ -1.62
COL20A1Q9P218 SNORA70C-201ENST00000384538 135 ntBASIC4.96□□□□□ -1.62
COL20A1Q9P218 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
COL20A1Q9P218 MIR1193-201ENST00000408109 78 ntBASIC4.96□□□□□ -1.62
COL20A1Q9P218 MIR1284-201ENST00000408337 120 ntBASIC4.96□□□□□ -1.62
COL20A1Q9P218 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.96□□□□□ -1.62
COL20A1Q9P218 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.96□□□□□ -1.62
COL20A1Q9P218 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.96□□□□□ -1.62
COL20A1Q9P218 SEPT2P1-201ENST00000419651 180 ntBASIC4.96□□□□□ -1.62
COL20A1Q9P218 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms