Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC118469.1-201ENST00000442943 488 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 RAB11AP1-201ENST00000442978 646 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 RNU7-125P-201ENST00000458760 62 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 RPL5P30-201ENST00000465511 891 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 VPS26AP1-201ENST00000483197 979 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC083829.1-201ENST00000503756 657 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 RNU6-488P-201ENST00000515918 99 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 DUXAP1-201ENST00000556632 463 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC087465.1-201ENST00000560574 245 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 BNIP3P5-201ENST00000562290 498 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AL020997.2-201ENST00000602607 184 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC020910.2-201ENST00000603635 610 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC133552.5-201ENST00000604266 540 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC115286.1-201ENST00000604298 434 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC072039.2-201ENST00000608883 439 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AC090116.1-201ENST00000615679 446 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 AL121873.1-201ENST00000616013 524 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 XPOTP1-201ENST00000443317 2398 ntBASIC4.53□□□□□ -1.68
NCKIPSDQ9NZQ3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RAD17P1-201ENST00000418130 2042 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC090971.4-201ENST00000560291 1800 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RNU1-108P-201ENST00000362556 161 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RNU6-839P-201ENST00000363347 108 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 Y_RNA.465-201ENST00000384293 102 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RN7SKP182-201ENST00000410772 298 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AL365203.2-201ENST00000423444 196 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC234779.1-201ENST00000425910 285 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AL732292.1-201ENST00000426692 226 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 MTCO1P54-201ENST00000430139 712 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC023347.2-201ENST00000433994 462 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 GTF2IP7-202ENST00000436677 309 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC108463.1-201ENST00000450258 347 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RPS15AP1-201ENST00000457423 391 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RPL23AP24-201ENST00000458203 385 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 SCARNA10-201ENST00000459255 330 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC109327.1-201ENST00000471666 403 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 MTND3P7-201ENST00000474435 343 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RAP1BP2-201ENST00000478270 544 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RPS3AP43-201ENST00000479743 781 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RN7SL810P-201ENST00000493031 276 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC021146.8-201ENST00000507455 733 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 OR5H4P-201ENST00000510851 923 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC008837.2-201ENST00000513076 418 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 RNA5SP135-201ENST00000517019 125 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AP003033.1-201ENST00000527244 415 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC100770.1-201ENST00000532310 322 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC022069.1-201ENST00000582910 658 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC090948.2-201ENST00000607363 564 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC090948.1-201ENST00000607464 549 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC012409.3-201ENST00000611343 981 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC023043.4-201ENST00000612081 449 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AL139418.1-201ENST00000613613 177 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AC091905.2-201ENST00000623143 306 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 CYP1D1P-201ENST00000416662 1433 ntBASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NCKIPSDQ9NZQ3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms