Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC100830.2-201ENST00000581636 240 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 U47924.1-201ENST00000606539 434 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 MIR15A-201ENST00000607334 83 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AL136985.2-201ENST00000607372 535 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AL451054.3-201ENST00000611115 776 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AL355365.1-201ENST00000616480 294 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC131238.1-201ENST00000617135 328 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 AC068769.1-201ENST00000474767 2426 ntBASIC8.18□□□□□ -1.1
RTN4Q9NQC3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RTN4Q9NQC3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 SNORD3E-201ENST00000362899 217 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 U3.15-201ENST00000365398 212 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 RNU6-639P-201ENST00000384074 107 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 RNU6-328P-201ENST00000390887 106 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 RFKP1-201ENST00000400940 428 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC006509.1-201ENST00000420788 634 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 PTMAP6-201ENST00000439110 327 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 EFCAB14P1-201ENST00000442409 463 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 LIN28AP2-201ENST00000445283 458 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 RPL30P15-201ENST00000457129 321 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 RPL21P41-201ENST00000459863 264 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC009153.1-201ENST00000485799 496 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 ACTG1P20-201ENST00000486001 468 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC027801.3-201ENST00000515049 698 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 SNORA31.20-201ENST00000517111 133 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 ATP5F1P5-201ENST00000526403 760 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC021006.3-201ENST00000530771 192 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 DYNLL1P4-201ENST00000549314 266 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC126323.4-201ENST00000566935 234 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC022743.1-201ENST00000624990 664 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 AC233280.20-201ENST00000637412 416 ntBASIC8.17□□□□□ -1.1
RTN4Q9NQC3 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RTN4Q9NQC3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 DUTP5-201ENST00000406790 469 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC245054.2-201ENST00000415639 319 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC003071.2-201ENST00000423857 315 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC018804.1-201ENST00000430381 618 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC234771.4-201ENST00000441416 730 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AL445991.1-201ENST00000450381 475 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC092451.1-201ENST00000480211 153 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC108860.1-201ENST00000484521 383 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 GAPDHP31-201ENST00000509325 1014 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC002456.2-201ENST00000509356 380 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC116337.1-201ENST00000509680 687 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 RNU6-976P-201ENST00000516086 111 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 RNU6-914P-201ENST00000516749 109 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC022634.1-201ENST00000520765 532 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AP001858.2-201ENST00000536213 601 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC009171.1-201ENST00000572673 266 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AP001836.1-201ENST00000604675 523 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AL360181.4-201ENST00000621752 134 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 AC135068.12-201ENST00000637370 931 ntBASIC8.16□□□□□ -1.1
RTN4Q9NQC3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RTN4Q9NQC3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms