Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC024560.2-201ENST00000507981 1497 ntBASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TM9SF3Q9HD45 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 RPL21P17-201ENST00000397467 475 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 XKRYP4-201ENST00000414395 483 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 XKRYP5-201ENST00000449659 483 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 RPL31P61-201ENST00000496160 376 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC079171.1-201ENST00000568788 914 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC104662.1-201ENST00000604448 511 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 BX322635.1-201ENST00000605804 496 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC019176.2-201ENST00000611579 315 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC016911.1-201ENST00000613297 452 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC020658.4-201ENST00000613987 684 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AL391261.4-201ENST00000616012 481 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC084757.4-201ENST00000616350 526 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AC073530.2-201ENST00000623987 261 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 AF001550.2-201ENST00000636643 217 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
TM9SF3Q9HD45 HSPA8P1-201ENST00000425843 1833 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 U1.1-201ENST00000384101 164 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 RNU6-40P-201ENST00000384254 107 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 SNORA51.12-201ENST00000384448 134 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 ZNF602P-201ENST00000405929 924 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AC069218.2-201ENST00000411665 344 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AL159169.1-201ENST00000421119 127 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AC087650.1-201ENST00000431445 468 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 ATP5HP2-201ENST00000433885 485 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 PRSS3P4-201ENST00000453323 162 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 RPL21P11-201ENST00000461458 483 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 RPL7P47-201ENST00000497299 556 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 UBE2CP3-201ENST00000502715 450 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AC006499.5-201ENST00000505037 514 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 NARSP2-201ENST00000518524 679 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 IGKV2-23-201ENST00000518729 323 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 C1DP5-201ENST00000525775 383 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AC090425.2-201ENST00000608818 501 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AL139089.1-201ENST00000620372 975 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AL773545.4-201ENST00000637262 310 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 AL513478.4-201ENST00000641636 310 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 MAPK10-373ENST00000641983 6772 ntBASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF3Q9HD45 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 PTMAP5-201ENST00000393073 333 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 MTCYBP24-201ENST00000420387 1106 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC244098.2-201ENST00000422068 99 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 PDSS1P2-201ENST00000449397 678 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 RN7SL271P-201ENST00000487601 295 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC026726.1-201ENST00000512859 601 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 HIGD1AP3-201ENST00000515857 278 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 SCARNA14-201ENST00000516903 136 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 DUXAP2-201ENST00000519198 589 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms