Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 ACTR3BP3-201ENST00000565577 979 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 WISP1-OT1-201ENST00000602893 642 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC093765.1-201ENST00000603758 881 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AL355816.1-201ENST00000607951 118 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 HULC.1-201ENST00000612720 240 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC123768.4-201ENST00000616244 701 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AP003072.4-201ENST00000624580 310 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC091046.3-201ENST00000631455 1574 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 LINC01355-201ENST00000566551 5444 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 AC125257.1-201ENST00000560400 2930 ntBASIC4.72□□□□□ -1.65
USP29Q9HBJ7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.72□□□□□ -1.65
USP29Q9HBJ7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.71□□□□□ -1.65
USP29Q9HBJ7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.71□□□□□ -1.65
USP29Q9HBJ7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 DDX43P2-201ENST00000604753 1354 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AL133264.1-201ENST00000407157 562 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 RPL23AP47-201ENST00000408017 460 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 RNU6-272P-201ENST00000411028 104 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 RN7SKP167-201ENST00000411047 285 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AL160275.2-201ENST00000412010 394 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC004448.2-201ENST00000422360 586 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC009965.2-201ENST00000425328 970 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 RPS26P47-201ENST00000427219 348 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AL353597.2-202ENST00000434901 373 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 ATP5C1P1-201ENST00000441945 895 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 NIP7P2-201ENST00000485801 544 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC092045.1-201ENST00000495716 1231 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC007016.1-201ENST00000512110 244 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 RPL12P22-201ENST00000519073 490 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AF279873.1-201ENST00000523393 313 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC023161.2-201ENST00000551218 780 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 PARP1P2-201ENST00000556806 195 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC115085.1-201ENST00000588924 229 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 HMGB2P1-201ENST00000591146 634 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC013562.2-201ENST00000611632 603 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC083809.1-201ENST00000615051 472 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP29Q9HBJ7 AC011477.1-204ENST00000623416 1325 ntBASIC4.71□□□□□ -1.66
USP29Q9HBJ7 MAPK10-320ENST00000641462 6696 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 ZNF833P-201ENST00000424938 1494 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 RNU6-500P-201ENST00000362349 107 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 Y_RNA.194-201ENST00000363985 102 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 SNORD113.2-201ENST00000364166 89 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 Y_RNA.505-201ENST00000384489 102 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 MIR129-1-201ENST00000384972 72 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 RNA5SP372-201ENST00000390836 115 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AL049697.2-201ENST00000403708 294 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 RN7SKP106-201ENST00000410832 272 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 RNU6-920P-201ENST00000410926 92 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 RPL21P108-201ENST00000413857 481 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 ATG4AP1-201ENST00000416893 538 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 NPM1P11-201ENST00000417106 855 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 BOLA3P4-201ENST00000418151 400 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 RPS25P9-201ENST00000435591 252 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.7□□□□□ -1.66
USP29Q9HBJ7 RPL37P3-201ENST00000456825 293 ntBASIC4.7□□□□□ -1.66
USP29Q9HBJ7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms