Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 OR11H5P-202ENST00000641612 1325 ntBASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SEC61A2Q9H9S3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 FRG1BP-201ENST00000278882 761 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 FRG1CP-201ENST00000358464 769 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 MIR323A-201ENST00000362199 86 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 U3.7-201ENST00000363668 216 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 SNORD81.2-201ENST00000365153 76 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-1151P-201ENST00000384684 107 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 GAPDHP42-201ENST00000406848 981 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 PDCL2P1-201ENST00000419302 352 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC007161.1-204ENST00000423039 460 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC073069.1-201ENST00000428657 441 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 ACTR3P2-201ENST00000439585 1257 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 CBX1P2-201ENST00000453841 458 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 SBDSP1-204ENST00000453858 737 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 RPL7AP52-201ENST00000458096 790 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 FAM172BP-201ENST00000487497 1089 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 HSPA8P13-201ENST00000523715 472 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AP003034.1-201ENST00000534621 422 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 LSM3P2-201ENST00000551246 273 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AL121821.2-201ENST00000556081 394 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC012182.1-201ENST00000570133 895 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC034268.2-201ENST00000571784 482 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 MIR1273E-201ENST00000581165 102 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AL359999.1-201ENST00000604513 294 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AP000942.4-201ENST00000604811 241 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC002550.2-201ENST00000621246 394 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC005858.4-201ENST00000623191 700 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AL049767.1-202ENST00000637826 242 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 MIR4302-201ENST00000638058 60 ntBASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SEC61A2Q9H9S3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 DDX18P4-201ENST00000511690 1966 ntBASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SEC61A2Q9H9S3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms