Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AC097504.1-201ENST00000515103 2415 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC024651.2-201ENST00000562480 2098 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 RNU6-115P-201ENST00000364310 107 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 SNORD116-11-201ENST00000383882 92 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.424-201ENST00000384063 103 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 RNU6-952P-201ENST00000391164 108 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC016739.1-201ENST00000405359 345 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 RPS6P23-201ENST00000413224 722 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 PDSS1P1-201ENST00000422953 1114 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 EIF1P2-201ENST00000428233 350 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 CYCSP6-201ENST00000434498 302 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 RPL7P28-201ENST00000437739 740 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC011816.1-201ENST00000441346 546 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC073910.1-201ENST00000445047 438 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC020550.1-201ENST00000447385 163 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 RPL31P44-201ENST00000447680 377 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 PSMC1P13-201ENST00000458195 985 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 RN7SL354P-201ENST00000469282 294 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC026402.1-201ENST00000513642 170 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 RNU6-1016P-201ENST00000516689 94 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AP002770.2-201ENST00000543613 532 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AL008729.2-201ENST00000606393 473 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 AL021918.2-201ENST00000613415 194 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 PISRT1.1-201ENST00000616930 107 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 SOCS5P3-201ENST00000425115 1576 ntBASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL25A1Q9BXS0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC046144.1-201ENST00000478559 1853 ntBASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL25A1Q9BXS0 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms