Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP88Q99567 AC004987.4-201ENST00000603383 338 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 AP000811.1-201ENST00000603803 651 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP88Q99567 AC080013.6-201ENST00000606185 215 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 SNORD91B-202ENST00000608459 222 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 AC072039.2-201ENST00000608883 439 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 AC004223.4-201ENST00000612426 332 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 AC008083.4-201ENST00000615076 444 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP88Q99567 AC007494.3-201ENST00000624660 743 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
NUP88Q99567 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP88Q99567 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.29□□□□□ -1.56
NUP88Q99567 AL445523.1-201ENST00000451184 1362 ntBASIC5.29□□□□□ -1.56
NUP88Q99567 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NUP88Q99567 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP88Q99567 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP88Q99567 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP88Q99567 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP88Q99567 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP88Q99567 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP88Q99567 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP88Q99567 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
NUP88Q99567 ELL2P3-201ENST00000457883 1602 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP88Q99567 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NUP88Q99567 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP88Q99567 ATP5F1P4-201ENST00000397288 746 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AC004022.2-201ENST00000413824 193 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP88Q99567 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AC092427.1-201ENST00000439177 601 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 ARL4AP3-201ENST00000441452 574 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 TDGF1P1-201ENST00000445734 527 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP88Q99567 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP88Q99567 AC092757.1-201ENST00000467293 467 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 RPL7P1-201ENST00000468161 747 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 RPL7P9-201ENST00000468715 747 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AC072039.1-201ENST00000477611 581 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP88Q99567 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP88Q99567 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.28□□□□□ -1.56
NUP88Q99567 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP88Q99567 AC018797.3-201ENST00000513388 1241 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.28□□□□□ -1.56
NUP88Q99567 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP88Q99567 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP88Q99567 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.28□□□□□ -1.56
NUP88Q99567 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP88Q99567 LSM6P2-201ENST00000552208 177 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP88Q99567 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP88Q99567 MIR3939-201ENST00000582614 106 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP88Q99567 AC010738.1-201ENST00000604970 987 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AC105129.3-201ENST00000605455 485 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AP001521.1-201ENST00000609150 300 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AC006338.2-201ENST00000616864 791 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 MIR6864-201ENST00000617935 70 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 AC073530.2-201ENST00000623987 261 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP88Q99567 MTCO1P14-201ENST00000441695 1559 ntBASIC5.28□□□□□ -1.56
NUP88Q99567 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NUP88Q99567 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP88Q99567 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
NUP88Q99567 AL391994.1-201ENST00000254724 282 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 BMS1P3-201ENST00000372011 932 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 MIR506-201ENST00000384998 124 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP88Q99567 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.27□□□□□ -1.57
NUP88Q99567 NUP35P2-201ENST00000416748 943 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP88Q99567 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP88Q99567 SDCBPP2-201ENST00000424643 885 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AL390023.1-201ENST00000428836 262 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP88Q99567 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP88Q99567 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP88Q99567 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP88Q99567 SLC31A1P1-201ENST00000451221 567 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 snoU13.7-201ENST00000459220 104 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP88Q99567 AC010618.1-201ENST00000469924 477 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 AC092045.1-201ENST00000495716 1231 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP88Q99567 KLRA1P-201ENST00000503499 986 ntBASIC5.27□□□□□ -1.57
NUP88Q99567 MTCYBP17-201ENST00000503579 789 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms