Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC124312.4-201ENST00000605533 310 ntBASIC2.56□□□□□ -2
GAFA1Q96PS6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.56□□□□□ -2
GAFA1Q96PS6 AL442067.2-201ENST00000614033 363 ntBASIC2.56□□□□□ -2
GAFA1Q96PS6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.56□□□□□ -2
GAFA1Q96PS6 OR5BR1P-201ENST00000524992 1330 ntBASIC2.56□□□□□ -2
GAFA1Q96PS6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.56□□□□□ -2
GAFA1Q96PS6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC2.56□□□□□ -2
GAFA1Q96PS6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
GAFA1Q96PS6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
GAFA1Q96PS6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.55□□□□□ -2
GAFA1Q96PS6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
GAFA1Q96PS6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.55□□□□□ -2
GAFA1Q96PS6 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
GAFA1Q96PS6 AC073325.2-201ENST00000339545 159 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 SNORA54-201ENST00000384281 123 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 RNU6-178P-201ENST00000384631 104 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.55□□□□□ -2
GAFA1Q96PS6 HMGB3P23-201ENST00000414981 585 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.55□□□□□ -2
GAFA1Q96PS6 RPS15AP6-201ENST00000420703 385 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.55□□□□□ -2
GAFA1Q96PS6 AL592494.2-201ENST00000425455 1548 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.55□□□□□ -2
GAFA1Q96PS6 TXNP1-201ENST00000441872 371 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.55□□□□□ -2
GAFA1Q96PS6 snoU13.22-201ENST00000459428 104 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 RN7SL20P-201ENST00000488827 297 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.55□□□□□ -2
GAFA1Q96PS6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.55□□□□□ -2
GAFA1Q96PS6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.55□□□□□ -2
GAFA1Q96PS6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
GAFA1Q96PS6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
GAFA1Q96PS6 PTGES3P3-201ENST00000511479 482 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.55□□□□□ -2
GAFA1Q96PS6 AC008885.1-201ENST00000514930 301 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.55□□□□□ -2
GAFA1Q96PS6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.55□□□□□ -2
GAFA1Q96PS6 BMS1P7-201ENST00000602440 1052 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.55□□□□□ -2
GAFA1Q96PS6 MIR8057-201ENST00000620957 69 ntBASIC2.55□□□□□ -2
GAFA1Q96PS6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.55□□□□□ -2
GAFA1Q96PS6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
GAFA1Q96PS6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
GAFA1Q96PS6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GAFA1Q96PS6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.54□□□□□ -2
GAFA1Q96PS6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
GAFA1Q96PS6 MIR22-201ENST00000362190 85 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 RNA5SP387-201ENST00000364226 106 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.54□□□□□ -2
GAFA1Q96PS6 AC245054.2-201ENST00000415639 319 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 RPL7P53-201ENST00000421245 739 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 B3GNT2P1-201ENST00000434960 952 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.54□□□□□ -2
GAFA1Q96PS6 MTND6P5-201ENST00000448266 512 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.54□□□□□ -2
GAFA1Q96PS6 KCTD9P5-201ENST00000504141 1170 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 AC114967.1-201ENST00000504890 259 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
GAFA1Q96PS6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.54□□□□□ -2
GAFA1Q96PS6 RN7SKP57-201ENST00000517248 293 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 AC074050.1-201ENST00000563247 211 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 AC125494.3-201ENST00000602759 455 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.54□□□□□ -2
GAFA1Q96PS6 AL162574.2-201ENST00000614618 657 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.54□□□□□ -2
GAFA1Q96PS6 AL356490.1-201ENST00000623079 479 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 AC019080.5-201ENST00000624891 757 ntBASIC2.54□□□□□ -2
GAFA1Q96PS6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.53□□□□□ -2
GAFA1Q96PS6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
GAFA1Q96PS6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.53□□□□□ -2
GAFA1Q96PS6 AL353746.1-201ENST00000566293 6881 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.53□□□□□ -2
GAFA1Q96PS6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
GAFA1Q96PS6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.53□□□□□ -2
GAFA1Q96PS6 Y_RNA.333-201ENST00000365274 102 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 SNORA46-201ENST00000384762 135 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 AJ239321.1-201ENST00000424255 564 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.53□□□□□ -2
GAFA1Q96PS6 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC2.53□□□□□ -2
GAFA1Q96PS6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.53□□□□□ -2
GAFA1Q96PS6 AC021146.5-201ENST00000503544 545 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 TXNP6-201ENST00000510190 310 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.53□□□□□ -2
GAFA1Q96PS6 HIGD1AP18-201ENST00000520730 278 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 AC068657.1-201ENST00000520807 306 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 AC245166.1-201ENST00000521012 253 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.53□□□□□ -2
GAFA1Q96PS6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
GAFA1Q96PS6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.53□□□□□ -2
GAFA1Q96PS6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.53□□□□□ -2
GAFA1Q96PS6 AC006539.2-201ENST00000601729 572 ntBASIC2.53□□□□□ -2
GAFA1Q96PS6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.53□□□□□ -2
GAFA1Q96PS6 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
GAFA1Q96PS6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
GAFA1Q96PS6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.53□□□□□ -2.01
GAFA1Q96PS6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC011155.1-201ENST00000316512 456 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 SNORA71.1-201ENST00000364523 117 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms