Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.46□□□□□ -1.54
ERCC4Q92889 AC126118.1-201ENST00000607744 628 ntBASIC5.46□□□□□ -1.54
ERCC4Q92889 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.46□□□□□ -1.54
ERCC4Q92889 AC025588.4-201ENST00000615802 908 ntBASIC5.46□□□□□ -1.54
ERCC4Q92889 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.46□□□□□ -1.54
ERCC4Q92889 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.46□□□□□ -1.54
ERCC4Q92889 AC099654.12-201ENST00000639868 649 ntBASIC5.46□□□□□ -1.54
ERCC4Q92889 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
ERCC4Q92889 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ERCC4Q92889 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.46□□□□□ -1.54
ERCC4Q92889 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
ERCC4Q92889 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ERCC4Q92889 AC107027.3-201ENST00000565095 3473 ntBASIC5.46□□□□□ -1.54
ERCC4Q92889 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ERCC4Q92889 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
ERCC4Q92889 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC4Q92889 Y_RNA.25-201ENST00000362528 102 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 RNU1-83P-201ENST00000363426 164 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 SNORD96B-201ENST00000386148 79 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 SPTLC1P2-201ENST00000407089 121 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 U3.36-201ENST00000408418 213 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC009237.2-201ENST00000421358 284 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 EIF1P1-201ENST00000421436 341 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC4Q92889 BRWD1P3-201ENST00000428816 390 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AC004938.1-201ENST00000438468 308 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 DNAJC19P4-201ENST00000440115 345 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC108463.1-201ENST00000450258 347 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC005229.2-201ENST00000456995 399 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC025674.1-201ENST00000507074 324 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AF279873.1-201ENST00000523393 313 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AP003392.2-201ENST00000527269 208 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC4Q92889 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC051619.2-201ENST00000559063 397 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AP001004.1-201ENST00000582468 324 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC015871.2-201ENST00000603605 948 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AC093765.1-201ENST00000603758 881 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 MEMO1P5-201ENST00000604810 406 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AC016769.4-201ENST00000616893 535 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.45□□□□□ -1.54
ERCC4Q92889 AL023881.1-201ENST00000621088 301 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 MIR6719-201ENST00000622428 87 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.45□□□□□ -1.54
ERCC4Q92889 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.45□□□□□ -1.54
ERCC4Q92889 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.45□□□□□ -1.54
ERCC4Q92889 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC4Q92889 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC4Q92889 TEX21P-201ENST00000447107 1476 ntBASIC5.45□□□□□ -1.54
ERCC4Q92889 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC4Q92889 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
ERCC4Q92889 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ERCC4Q92889 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC4Q92889 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.44□□□□□ -1.54
ERCC4Q92889 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC4Q92889 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC4Q92889 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.44□□□□□ -1.54
ERCC4Q92889 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
ERCC4Q92889 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
ERCC4Q92889 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ERCC4Q92889 RNU6-251P-201ENST00000363235 104 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.44□□□□□ -1.54
ERCC4Q92889 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.44□□□□□ -1.54
ERCC4Q92889 RNU1-106P-201ENST00000384382 164 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 OR6C69P-201ENST00000394268 893 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 ARL4AP5-201ENST00000404372 599 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 U3.35-201ENST00000408405 208 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.44□□□□□ -1.54
ERCC4Q92889 RNU2-65P-201ENST00000410162 185 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 RNA5SP345-201ENST00000410646 108 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 CYP1D1P-201ENST00000416662 1433 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 RBMY2KP-201ENST00000418221 992 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.44□□□□□ -1.54
ERCC4Q92889 AC093698.1-201ENST00000423843 571 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.44□□□□□ -1.54
ERCC4Q92889 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 AC104651.1-201ENST00000427559 735 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.44□□□□□ -1.54
ERCC4Q92889 FABP7P2-201ENST00000429946 379 ntBASIC5.44□□□□□ -1.54
ERCC4Q92889 LYPLA1P1-201ENST00000434514 622 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms