Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC008033.1-201ENST00000216407 1162 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 SPRR2C-201ENST00000290702 219 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 RNU1-15P-201ENST00000353977 144 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 NACA3P-201ENST00000359690 648 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 OR1L1-202ENST00000373686 1083 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 RNA5SP104-201ENST00000410989 118 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC009518.2-201ENST00000418056 731 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC114814.2-201ENST00000419195 485 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 MTND2P18-201ENST00000419962 1030 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 EIF1P3-201ENST00000423841 334 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC073335.1-201ENST00000427776 363 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC002542.1-201ENST00000440683 193 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL353748.1-201ENST00000440753 474 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL512326.1-201ENST00000443050 721 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL359073.1-201ENST00000448036 403 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 MRPL42P4-201ENST00000453267 443 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC073522.1-201ENST00000483312 377 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC025445.1-201ENST00000502728 300 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC113347.3-201ENST00000509113 148 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC105313.1-201ENST00000509121 353 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 RNU6-347P-201ENST00000516658 105 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF4Q92544 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC087373.1-201ENST00000524920 491 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC124293.1-201ENST00000530034 493 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 POLR2KP1-201ENST00000553226 168 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC106785.1-201ENST00000565935 262 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 CYP4A43P-201ENST00000568156 121 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL354943.1-201ENST00000572103 781 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC040904.1-201ENST00000590850 223 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL133507.1-201ENST00000605269 557 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AL031666.3-201ENST00000609320 1006 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC131159.1-201ENST00000621854 213 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC078883.4-201ENST00000623218 367 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC067852.7-201ENST00000623270 535 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AP006248.2-201ENST00000623309 592 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC109454.4-201ENST00000623411 649 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC004943.3-201ENST00000624116 600 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC112484.5-201ENST00000624189 228 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 AP003399.1-201ENST00000637534 361 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF4Q92544 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF4Q92544 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF4Q92544 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF4Q92544 MAPK10-253ENST00000641010 4072 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TM9SF4Q92544 AC104454.1-201ENST00000421341 1401 ntBASIC4.04□□□□□ -1.76
TM9SF4Q92544 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF4Q92544 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF4Q92544 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 SNORD74.4-201ENST00000364129 80 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 RNU6-304P-201ENST00000364855 107 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF4Q92544 SNORA11C-201ENST00000408532 129 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 RNA5SP317-201ENST00000410176 116 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 RNA5SP311-201ENST00000411290 116 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 AC062016.2-201ENST00000420950 676 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 AL008629.1-201ENST00000438615 184 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 AC122718.1-201ENST00000439448 744 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF4Q92544 AC104306.1-201ENST00000449702 371 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 RNU6-1218P-201ENST00000458990 108 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 FAM133DP-201ENST00000464802 691 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.03□□□□□ -1.76
TM9SF4Q92544 AC041039.1-201ENST00000485656 536 ntBASIC4.03□□□□□ -1.76
TM9SF4Q92544 RPS3AP22-201ENST00000488297 769 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms