Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 COX6B1P1-201ENST00000415962 213 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 BRWD1P3-201ENST00000428816 390 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 C8orf59P1-201ENST00000429930 303 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 LARP1BP3-201ENST00000437229 869 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 USP9YP29-201ENST00000445112 563 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 ST13P20-201ENST00000447996 1065 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 RPL23AP15-201ENST00000450202 459 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 RPL26P28-201ENST00000451325 435 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 MTCYBP1-201ENST00000454315 1119 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 SUMO2P2-201ENST00000456482 255 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 CFTRP1-201ENST00000456646 183 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC107401.1-201ENST00000503426 685 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 KLRA1P-201ENST00000503499 986 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC008638.1-201ENST00000506035 866 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 snoU109.6-201ENST00000516831 118 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AL110118.1-201ENST00000553543 400 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 PSMB7P1-201ENST00000556349 514 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 OR7E18P-201ENST00000592589 702 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC068276.1-201ENST00000605793 379 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC023813.4-201ENST00000607580 580 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AL355816.1-201ENST00000607951 118 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC116651.1-201ENST00000609724 556 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC018816.2-201ENST00000621460 353 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC079228.1-201ENST00000624774 1049 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC009313.2-201ENST00000417893 1941 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 LINC00561-201ENST00000565815 2738 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 Y_RNA.359-201ENST00000365498 102 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 RNU1-63P-201ENST00000383902 164 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 Y_RNA.517-201ENST00000384551 106 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 NIPA2P1-201ENST00000426223 976 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AL512286.1-201ENST00000439244 400 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 RNA5SP269-201ENST00000459032 137 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 RPL30P9-201ENST00000465586 330 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 RPL7P16-201ENST00000479738 738 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 RPS4XP15-201ENST00000489210 795 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 MTCYBP43-201ENST00000513621 740 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 RNU6-488P-201ENST00000515918 99 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 RN7SKP276-201ENST00000516242 268 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 IGLV3-26-201ENST00000520756 302 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 ARL2BPP5-201ENST00000523141 481 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC087276.1-201ENST00000529659 480 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 SULT1C2P2-201ENST00000562517 294 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 BGLT3-201ENST00000564523 994 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 KPNA2P3-201ENST00000584190 848 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AP003465.2-201ENST00000602571 373 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AL031320.1-201ENST00000604177 357 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AP002360.3-201ENST00000607673 710 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC073968.1-201ENST00000618594 637 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC025048.6-202ENST00000627667 438 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 OR2L1P-202ENST00000641567 1023 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 AC090017.1-201ENST00000548612 1779 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4AQ8WYN0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms