Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 RPS4XP13-201ENST00000483219 789 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 AC018797.3-201ENST00000513388 1241 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 APOOP4-201ENST00000513530 597 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 RNU6-237P-201ENST00000515985 71 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 RNU1-143P-201ENST00000516296 146 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 U1.23-201ENST00000610293 146 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 RNU1-68P-201ENST00000615382 146 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 U1.39-201ENST00000621562 146 ntBASIC2.21□□□□□ -2.05
ALMS1Q8TCU4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AC116096.1-201ENST00000566804 2314 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AMD1P2-201ENST00000412936 992 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AP002884.2-201ENST00000471647 395 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 KCTD9P6-201ENST00000522306 950 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 PSMA2P1-201ENST00000526365 646 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 RPL23AP92-201ENST00000603609 255 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AC013470.3-201ENST00000420252 1194 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 NUP35P1-201ENST00000422734 947 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 RPL31P50-201ENST00000471002 296 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 MIR2114-201ENST00000516645 80 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 RNU6-1231P-201ENST00000517185 103 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 NDUFB9P3-201ENST00000521269 501 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AC006946.3-201ENST00000609791 756 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AP003485.2-201ENST00000623636 610 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AC021755.1-201ENST00000559747 1447 ntBASIC2.21□□□□□ -2.06
ALMS1Q8TCU4 AC073508.1-201ENST00000428866 656 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC069499.1-201ENST00000489433 509 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 RN7SKP132-201ENST00000516001 208 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 OR4R3P-201ENST00000525084 838 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AP000916.1-201ENST00000533869 835 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 OR56A5-201ENST00000340110 738 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 RPL23AP82-202ENST00000427528 469 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AL357552.1-201ENST00000445254 415 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 CENPBD1P1-201ENST00000464061 469 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC017037.1-201ENST00000508460 471 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 SCARNA20.6-201ENST00000517251 106 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC079600.2-201ENST00000550076 130 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 uc_338.32-201ENST00000615087 172 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC127526.1-201ENST00000417526 366 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 Z93242.1-201ENST00000427102 353 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC022018.1-201ENST00000430685 241 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC104058.1-201ENST00000448028 297 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 FDX1P2-201ENST00000450769 375 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC093755.1-201ENST00000512950 1023 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC109329.2-201ENST00000519658 482 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC018692.3-201ENST00000623929 123 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AL606537.1-201ENST00000607258 2011 ntBASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ALMS1Q8TCU4 AC066616.2-201ENST00000559334 1481 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms