Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.86□□□□□ -2.11
SPTSSBQ8NFR3 MIR6071-201ENST00000616741 78 ntBASIC1.86□□□□□ -2.11
SPTSSBQ8NFR3 SNHG22-203ENST00000617833 660 ntBASIC1.86□□□□□ -2.11
SPTSSBQ8NFR3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.86□□□□□ -2.11
SPTSSBQ8NFR3 AF001550.2-201ENST00000636643 217 ntBASIC1.86□□□□□ -2.11
SPTSSBQ8NFR3 AL158163.1-201ENST00000603915 1649 ntBASIC1.86□□□□□ -2.11
SPTSSBQ8NFR3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SPTSSBQ8NFR3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
SPTSSBQ8NFR3 AC068647.1-201ENST00000489539 2265 ntBASIC1.86□□□□□ -2.11
SPTSSBQ8NFR3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 RNA5SP191-201ENST00000362585 102 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 Y_RNA.62-201ENST00000362840 99 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 RPS27AP11-201ENST00000402798 447 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 GSTA8P-201ENST00000404253 637 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 RN7SKP220-201ENST00000410611 288 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 RN7SKP213-201ENST00000410746 298 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC245054.2-201ENST00000415639 319 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 RAD23BP2-201ENST00000416003 1207 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 RPS15AP40-201ENST00000419621 391 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 PSMA2P3-201ENST00000429685 675 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 RBMY2QP-201ENST00000429799 1147 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 COX6B1P7-201ENST00000430845 235 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 UQCRHP3-201ENST00000451503 251 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 RPS29P12-201ENST00000460178 152 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC010301.1-201ENST00000473936 355 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AL132838.2-201ENST00000492041 314 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 HMGB1P3-201ENST00000502802 616 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AIG1P1-201ENST00000503376 148 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 UBE2Q2P10-201ENST00000514854 900 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 IGLVIV-65-201ENST00000517313 360 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC138701.1-201ENST00000524329 714 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC009117.1-201ENST00000563948 554 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC020895.1-201ENST00000595362 272 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC104785.1-201ENST00000603220 588 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC113368.1-201ENST00000603736 382 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 MIR6768-201ENST00000610734 72 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AC012409.3-201ENST00000611343 981 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 MIR6813-201ENST00000621638 56 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AL732618.1-201ENST00000623251 301 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 AP003355.3-201ENST00000623465 114 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 ZNF37BP-203ENST00000452306 1352 ntBASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC1.85□□□□□ -2.11
SPTSSBQ8NFR3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AL049737.1-201ENST00000413920 1403 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AL592148.3-201ENST00000608771 2646 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 RNU6-50P-201ENST00000362356 103 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 RN7SKP162-201ENST00000363605 345 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 RNA5SP399-201ENST00000364003 117 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 RNU6-1027P-201ENST00000383998 107 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 SNORD65-201ENST00000391079 73 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 SNORA17A-201ENST00000391185 133 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 HMGB3P18-201ENST00000406327 590 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 U3.39-201ENST00000408569 239 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 EIF2S2P3-201ENST00000428356 999 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AC005189.1-201ENST00000431286 310 ntBASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC1.84□□□□□ -2.11
SPTSSBQ8NFR3 SNRPEP4-201ENST00000435815 279 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms