Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RPS20P2-201ENST00000402520 389 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 HMGB1P20-201ENST00000402555 677 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 RN7SKP240-201ENST00000410583 375 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 SPA17P1-201ENST00000416656 452 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC009965.2-201ENST00000425328 970 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 TIMM9P3-201ENST00000428659 274 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 OR6D1P-201ENST00000436165 939 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 SNRPEP8-201ENST00000442866 260 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC002381.1-201ENST00000447049 280 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AP006222.1-205ENST00000450734 457 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC108161.1-201ENST00000461060 402 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 MTND1P3-201ENST00000484956 952 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC114781.4-201ENST00000513707 639 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 FAM92A1P1-201ENST00000528023 890 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 CENPUP2-201ENST00000555897 1186 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AL499605.1-201ENST00000604628 403 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 COX6CP4-201ENST00000605798 228 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AL590282.1-201ENST00000610379 1136 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC002553.4-201ENST00000616896 331 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AC104985.2-201ENST00000620598 500 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 AL445264.1-201ENST00000621719 171 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 RNU6-156P-201ENST00000621869 107 ntBASIC5.08□□□□□ -1.6
HIPK4Q8NE63 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIPK4Q8NE63 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 SNORA72.1-201ENST00000363485 129 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 RNU6-1090P-201ENST00000364065 94 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 RNA5SP394-201ENST00000364216 119 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 Y_RNA.402-201ENST00000383972 102 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AL023807.1-201ENST00000407932 359 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 MTCO1P17-201ENST00000411522 491 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 MTATP6P27-201ENST00000416987 621 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AL589872.1-201ENST00000426602 288 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 RPEP2-201ENST00000432149 701 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 RPL12P17-201ENST00000432393 498 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 BTF3P10-201ENST00000433415 495 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AL450996.1-201ENST00000445574 1202 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 MTND5P20-201ENST00000448677 143 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 FABP3P2-201ENST00000453169 399 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 MTCO3P20-201ENST00000454926 688 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC099563.1-201ENST00000456086 418 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 RN7SL809P-201ENST00000482040 297 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC022133.1-201ENST00000490961 571 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC006390.1-201ENST00000508068 283 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC098799.2-201ENST00000509466 868 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 BNIP3P1-201ENST00000547295 580 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 HMGB1P33-201ENST00000563485 527 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AL359999.1-201ENST00000604513 294 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC109583.2-201ENST00000617367 129 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC015871.5-202ENST00000623252 701 ntBASIC5.07□□□□□ -1.6
HIPK4Q8NE63 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.07□□□□□ -1.6
HIPK4Q8NE63 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms