Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 AC015982.1-201ENST00000608113 465 ntBASIC5.76□□□□□ -1.49
PHC3Q8NDX5 AC006504.8-201ENST00000621046 635 ntBASIC5.76□□□□□ -1.49
PHC3Q8NDX5 SNX18P12-201ENST00000624821 759 ntBASIC5.76□□□□□ -1.49
PHC3Q8NDX5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 BRAFP1-201ENST00000445336 2703 ntBASIC5.76□□□□□ -1.49
PHC3Q8NDX5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 AL592148.3-201ENST00000608771 2646 ntBASIC5.76□□□□□ -1.49
PHC3Q8NDX5 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PHC3Q8NDX5 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 RNU1-74P-201ENST00000384108 171 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 snosnR66.1-201ENST00000391095 99 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 RPS4XP8-201ENST00000402039 771 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 HMGN1P20-201ENST00000411849 300 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC012065.2-201ENST00000421295 375 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC079807.1-201ENST00000429993 481 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AL590233.1-201ENST00000430017 456 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC126120.1-201ENST00000431082 470 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC096775.1-201ENST00000437724 448 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AL049734.2-201ENST00000441066 616 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AL596266.1-201ENST00000448132 400 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 RNU6-261P-201ENST00000459506 102 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 RPS20P20-201ENST00000460498 340 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AP000942.1-201ENST00000463969 747 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 MTCO2P29-201ENST00000465212 189 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC011411.1-201ENST00000509592 876 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 RNA5SP271-201ENST00000516700 88 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 MIR2117-201ENST00000516780 80 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AP000907.2-201ENST00000530827 353 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC034105.3-201ENST00000565294 442 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC011712.1-201ENST00000588959 234 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 RPL26P30-202ENST00000602923 645 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 FAM27E4-201ENST00000605259 342 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AL136363.1-201ENST00000605349 337 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC116447.1-201ENST00000613153 453 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 AC005224.3-201ENST00000584683 2140 ntBASIC5.75□□□□□ -1.49
PHC3Q8NDX5 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PHC3Q8NDX5 ZNF652P1-201ENST00000442420 1309 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 RN7SKP145-201ENST00000363291 303 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 Y_RNA.142-201ENST00000363491 102 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 RNU4-2-201ENST00000365668 141 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 RPL31P52-201ENST00000407532 367 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 RN7SKP29-201ENST00000410957 272 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 RN7SKP247-201ENST00000411094 308 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 RPL36AP36-201ENST00000418616 301 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 SDCBPP3-201ENST00000419629 891 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 ELOCP4-201ENST00000420090 333 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AC023141.8-201ENST00000442554 208 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AC239809.1-201ENST00000450470 217 ntBASIC5.74□□□□□ -1.49
PHC3Q8NDX5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.74□□□□□ -1.49
PHC3Q8NDX5 snoU13.7-201ENST00000459220 104 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms