Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 ARAFP2-201ENST00000440565 559 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 CYCSP34-201ENST00000458172 304 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 RPL23AP24-201ENST00000458203 385 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC004924.1-201ENST00000480160 781 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 RN7SL558P-201ENST00000497468 299 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 MYL12BP2-201ENST00000503948 512 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC090071.1-201ENST00000507713 644 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 MTCO1P35-201ENST00000515270 228 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 RN7SKP244-201ENST00000516513 307 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 HMGB1P23-201ENST00000518743 568 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 IGHV3-32-201ENST00000519182 355 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 MTCYBP13-201ENST00000578634 1093 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 SNORA74C-1-201ENST00000580726 201 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC083760.1-201ENST00000589621 670 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 VN1R85P-201ENST00000601587 426 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC015871.2-201ENST00000603605 948 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC115286.1-201ENST00000604298 434 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AL390816.3-201ENST00000604527 1066 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 U4.5-201ENST00000617137 123 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AP005019.3-201ENST00000620418 560 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC074140.1-201ENST00000621617 208 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 MTND5P23-201ENST00000430812 1655 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 ADAM5-202ENST00000399789 1942 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC073544.1-201ENST00000600110 1595 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 IQCB2P-201ENST00000401788 1633 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 Y_RNA.302-201ENST00000364997 102 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 RNU1-82P-201ENST00000390851 165 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AL358176.3-201ENST00000420757 454 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 FHP1-201ENST00000442741 703 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 MTCO3P11-201ENST00000455103 774 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 GTF2IP22-201ENST00000554443 182 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 RPS3AP4-201ENST00000555161 764 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC040958.1-201ENST00000561102 201 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 MIR3936-201ENST00000584304 110 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC133552.5-201ENST00000604266 540 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC004067.1-201ENST00000608733 700 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC114781.5-201ENST00000615297 108 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC022140.2-201ENST00000623500 188 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 SEPT14P19-203ENST00000633205 211 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 AC025031.4-201ENST00000621248 3271 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 SMG1P7-201ENST00000565246 2704 ntBASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A3Q8N4M1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms