Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 OR8G2P-201ENST00000412796 908 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 ELOCP9-201ENST00000418624 239 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC007389.2-201ENST00000434630 306 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 TMX2P1-201ENST00000436507 708 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 USP9YP25-201ENST00000457708 443 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 RPL7L1P8-201ENST00000469911 741 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC090071.1-201ENST00000507713 644 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC109445.1-201ENST00000512356 383 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 LSM6P2-201ENST00000552208 177 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC053481.4-201ENST00000583164 216 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AL161729.3-201ENST00000603533 673 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC233280.2-201ENST00000603917 1070 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC009220.3-201ENST00000604318 586 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC021755.4-201ENST00000616620 456 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC121761.2-201ENST00000617300 689 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC009159.2-201ENST00000617603 606 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC004777.1-201ENST00000624317 287 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 OR51H2P-202ENST00000641424 3046 ntBASIC4.76□□□□□ -1.65
HERC6Q8IVU3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.76□□□□□ -1.65
HERC6Q8IVU3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 SNORA71.3-201ENST00000362582 128 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 RNU6-251P-201ENST00000363235 104 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 RNU6-761P-201ENST00000384148 107 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 RNU6-441P-201ENST00000384545 106 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 RPL23AP47-201ENST00000408017 460 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 RNU2-42P-201ENST00000410697 113 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AL136133.1-201ENST00000413694 376 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 RPS3AP9-201ENST00000417027 792 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 KRR1P1-201ENST00000419430 803 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC009237.2-201ENST00000421358 284 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 TPTE2P3-201ENST00000441562 1189 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 VN1R105P-201ENST00000486595 910 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC146944.2-203ENST00000502493 354 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 NPM1P41-201ENST00000512920 831 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC139495.1-202ENST00000513164 354 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 FABP5P12-201ENST00000515543 389 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC027309.2-201ENST00000520566 192 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC105233.3-201ENST00000531125 744 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AL132657.2-201ENST00000564417 358 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 RPL7P50-201ENST00000600588 727 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 BPIFA4P-203ENST00000603168 689 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 MKKS-204ENST00000639674 192 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.75□□□□□ -1.65
HERC6Q8IVU3 AC005539.1-201ENST00000443768 1479 ntBASIC4.75□□□□□ -1.65
HERC6Q8IVU3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERC6Q8IVU3 AL672167.1-203ENST00000641299 2975 ntBASIC4.74□□□□□ -1.65
HERC6Q8IVU3 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms