Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC022146.1-201ENST00000595307 847 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 RPL26P30-202ENST00000602923 645 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC103881.1-201ENST00000603476 538 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC093765.1-201ENST00000603758 881 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 BNIP3P4-201ENST00000604946 565 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC069545.1-201ENST00000605671 358 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC012409.3-201ENST00000611343 981 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC007546.1-201ENST00000619452 559 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC073534.2-201ENST00000620377 381 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC006840.1-201ENST00000623069 542 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC024595.1-201ENST00000623088 387 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC007342.8-201ENST00000623278 678 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 PCMTD1P7-201ENST00000634506 357 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AC091046.3-201ENST00000631455 1574 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 AL137100.1-201ENST00000556703 1620 ntBASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
ZNF549Q6P9A3 OR56B2P-202ENST00000641377 2453 ntBASIC4.34□□□□□ -1.72
ZNF549Q6P9A3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ZNF549Q6P9A3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 VPS35P1-201ENST00000563400 1518 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC095050.2-201ENST00000510748 1458 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC011477.1-204ENST00000623416 1325 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 RNU6-1283P-201ENST00000365314 105 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 SNORD66.1-201ENST00000391230 76 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 RN7SKP142-201ENST00000411236 328 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 RPL7P8-201ENST00000411964 730 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 PGBD4P8-201ENST00000412993 562 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 CDK8P2-201ENST00000415020 547 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 GTF2IP23-201ENST00000423746 351 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 USP9YP31-201ENST00000431405 881 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL590103.1-201ENST00000434488 307 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL353093.1-201ENST00000441292 436 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 RPL35AP15-201ENST00000468042 339 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 RPL7P1-201ENST00000468161 747 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 RPL7P9-201ENST00000468715 747 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC015795.1-201ENST00000513669 327 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 CDH12P4-201ENST00000517835 295 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 CDH12P3-201ENST00000517935 295 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 CDH12P1-201ENST00000518435 295 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 OR5BC1P-201ENST00000529327 739 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL139174.1-201ENST00000531489 886 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AP000873.5-201ENST00000533906 236 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC063949.1-201ENST00000552900 865 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL512347.1-201ENST00000566420 503 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 MIR4675-201ENST00000577898 77 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 MIR4700-201ENST00000578311 74 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AP005119.2-201ENST00000579735 1105 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC087683.1-201ENST00000591187 441 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC079089.3-201ENST00000603094 673 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC087283.1-201ENST00000604029 1074 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL513477.2-201ENST00000607858 568 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC131235.4-201ENST00000609288 620 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL121873.1-201ENST00000616013 524 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AL603839.4-201ENST00000624658 1005 ntBASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
ZNF549Q6P9A3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZNF549Q6P9A3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms