Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 AC021205.2-201ENST00000480069 347 ntBASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 ACTG1P13-201ENST00000486987 1043 ntBASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 SCARNA20.6-201ENST00000517251 106 ntBASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 COX6CP8-201ENST00000522620 226 ntBASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 MIR4524B-201ENST00000581569 115 ntBASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 AC103858.2-201ENST00000621471 543 ntBASIC5.15□□□□□ -1.58
SNAPC4Q5SXM2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.15□□□□□ -1.59
SNAPC4Q5SXM2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 AC003685.2-201ENST00000422795 395 ntBASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 RPS4XP13-201ENST00000483219 789 ntBASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 ASNSP4-201ENST00000511103 447 ntBASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 AC010306.1-201ENST00000523223 1117 ntBASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 VN1R78P-201ENST00000597393 564 ntBASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SNAPC4Q5SXM2 RNU1-89P-201ENST00000384592 164 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AP000942.1-201ENST00000463969 747 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC117440.1-201ENST00000474107 571 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 HMGB1P3-201ENST00000502802 616 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 MIR7843-201ENST00000622274 79 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC017071.1-201ENST00000564407 2204 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 GOLGA5P1-201ENST00000507317 980 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC017037.2-201ENST00000513850 890 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC099489.2-201ENST00000574976 260 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 BNIP3P38-201ENST00000601117 544 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 AC007619.2-201ENST00000605743 379 ntBASIC5.13□□□□□ -1.59
SNAPC4Q5SXM2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 SAGE4P-201ENST00000442271 3381 ntBASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 OR13C3-201ENST00000374781 1108 ntBASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 AC112492.1-201ENST00000449607 712 ntBASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 RPS20P22-201ENST00000473700 357 ntBASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 AC022882.1-201ENST00000532142 501 ntBASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 OR4G1P-202ENST00000641173 1788 ntBASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SNAPC4Q5SXM2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 AC009313.2-201ENST00000417893 1941 ntBASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 NPM1P11-201ENST00000417106 855 ntBASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 AC022018.1-201ENST00000430685 241 ntBASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 AC011242.1-201ENST00000433596 1158 ntBASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 AL513124.1-201ENST00000450410 614 ntBASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 SYT14P1-201ENST00000481459 721 ntBASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 PCBP2P3-201ENST00000509726 843 ntBASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 CYCSP41-201ENST00000616920 296 ntBASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
SNAPC4Q5SXM2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms