Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AC004943.3-201ENST00000624116 600 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AC025125.1-201ENST00000624743 1922 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AL645937.1-201ENST00000641739 1652 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 AC032011.1-201ENST00000611703 1549 ntBASIC3.65□□□□□ -1.83
PTPN20Q4JDL3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 RNU4-35P-201ENST00000362588 141 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AL159169.1-201ENST00000421119 127 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 RPL21P110-201ENST00000433345 446 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AC073063.1-201ENST00000434352 607 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 RPS15AP29-201ENST00000445539 400 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 MRPS31P2-201ENST00000451581 518 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 SUMO1P1-201ENST00000497904 306 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 SNX5P1-201ENST00000505757 1041 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 RNU6-889P-201ENST00000517189 103 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 MTCO3P22-201ENST00000603219 784 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AC113194.1-201ENST00000606037 500 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AC242628.1-201ENST00000606810 391 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 AL513302.2-201ENST00000562313 1842 ntBASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN20Q4JDL3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 PTMAP2-201ENST00000397627 327 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 RSL24D1P1-201ENST00000404972 493 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 RANP4-201ENST00000413361 655 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 RPL31P45-201ENST00000419532 356 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AL590623.1-201ENST00000427864 105 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AC092641.1-201ENST00000440229 772 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 HMGB1P47-201ENST00000511281 589 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 SNORA70.14-201ENST00000516205 110 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 SNORA67.7-201ENST00000516664 135 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 SNORA70.19-201ENST00000516717 90 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 OR5B10P-201ENST00000532869 642 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AC006270.2-201ENST00000578523 652 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 MIR3158-1-201ENST00000583596 81 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AC006065.5-201ENST00000623427 349 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AC138649.5-201ENST00000637456 137 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AL392088.2-201ENST00000637607 285 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN20Q4JDL3 AL353746.1-201ENST00000566293 6881 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 RNA5SP197-201ENST00000363357 119 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 SNORA27.3-201ENST00000364937 134 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 MIR153-1-201ENST00000384914 90 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 Z86062.1-201ENST00000406773 777 ntBASIC3.62□□□□□ -1.83
PTPN20Q4JDL3 Z99755.1-201ENST00000414048 380 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms