Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CYCSP46-201ENST00000423569 204 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AL035410.1-201ENST00000427409 427 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 MUPP-201ENST00000438111 566 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 TRIM60P18-201ENST00000441518 828 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 RPL21P133-201ENST00000443666 476 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 BX842559.2-201ENST00000451418 605 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC091564.1-201ENST00000464563 479 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC063943.1-201ENST00000465434 453 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 RPL31P50-201ENST00000471002 296 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 RN7SL346P-201ENST00000491561 294 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC116347.2-201ENST00000514912 523 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 RNA5SP43-201ENST00000516559 110 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 COX6CP8-201ENST00000522620 226 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AP004247.1-201ENST00000531556 1289 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC083760.1-201ENST00000589621 670 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC008745.1-201ENST00000604064 271 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AC104687.2-201ENST00000604442 342 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AL391497.1-201ENST00000608671 547 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 MIR7703-201ENST00000620784 77 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 AP000346.3-201ENST00000622821 210 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 PABPC1P7-201ENST00000413177 1513 ntBASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC144BQ3MJ40 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AL022578.1-201ENST00000439330 1433 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 SNORD82-201ENST00000365530 70 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 RNU6-398P-201ENST00000384143 109 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 Y_RNA.553-201ENST00000384670 102 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC092017.2-201ENST00000427600 362 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 PRELID3BP10-201ENST00000431957 584 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 LARP1BP3-201ENST00000437229 869 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AL117351.1-201ENST00000438864 766 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 NDUFA12P1-201ENST00000455914 406 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 RNU6-956P-201ENST00000458868 103 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 RNA5SP269-201ENST00000459032 137 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 RN7SL189P-201ENST00000468631 289 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC022447.3-201ENST00000506865 495 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 UBE2FP2-201ENST00000566646 462 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 MIR4458-201ENST00000578872 75 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC103987.3-201ENST00000582071 292 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 BNIP3P23-201ENST00000599655 511 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AL445264.1-201ENST00000621719 171 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC004009.2-201ENST00000623016 728 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 MIR7641-1-201ENST00000627518 61 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AC090582.1-201ENST00000636321 199 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 AL731566.1-201ENST00000620490 1937 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 MTND4P4-201ENST00000439033 1366 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 MTND4P16-201ENST00000466108 1367 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 KPNA2P2-201ENST00000419546 1489 ntBASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC144BQ3MJ40 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 MFSD8-216ENST00000641147 4009 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 Y_RNA.194-201ENST00000363985 102 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RN7SKP153-201ENST00000365026 316 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RNU6-730P-201ENST00000383954 104 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 SNORA70E-201ENST00000384492 135 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RNY3P10-201ENST00000384764 102 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RPL31P1-201ENST00000398116 372 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 Z97832.1-201ENST00000402490 328 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RN7SKP142-201ENST00000411236 328 ntBASIC5.76□□□□□ -1.49
CCDC144BQ3MJ40 RAB28P1-201ENST00000411517 641 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms