Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC009509.4-201ENST00000619202 509 ntBASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 AC068792.1-201ENST00000621354 417 ntBASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 AL359740.1-201ENST00000624340 592 ntBASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 OR4G11P-202ENST00000642116 1414 ntBASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 AC083843.3-201ENST00000623679 2186 ntBASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 SDAD1P1-202ENST00000524156 2051 ntBASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTCHD3Q3KNS1 TLK1P1-201ENST00000456760 2440 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 SMG1P6-201ENST00000532337 2930 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 MAPK10-263ENST00000641052 4307 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 MTCO1P14-201ENST00000441695 1559 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RNU6-433P-201ENST00000363216 104 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RNU6-660P-201ENST00000364566 109 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RNVU1-6-201ENST00000364688 164 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RNU6-723P-201ENST00000383973 107 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RNU6-441P-201ENST00000384545 106 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL359643.1-201ENST00000404109 423 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RNA5SP113-201ENST00000410486 84 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL133384.1-201ENST00000412744 351 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RPL36AP10-201ENST00000421785 322 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 MUPP-201ENST00000438111 566 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC004938.1-201ENST00000438468 308 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 H2AFZP6-201ENST00000444403 394 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 BMI1P1-201ENST00000445879 941 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 ST13P20-201ENST00000447996 1065 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 OR1H1P-201ENST00000448731 937 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC097493.1-201ENST00000463958 372 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RPL30P9-201ENST00000465586 330 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RN7SL738P-201ENST00000470264 297 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 RPS4XP15-201ENST00000489210 795 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC114981.1-201ENST00000503897 678 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC079140.3-201ENST00000511111 550 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 MTCYBP43-201ENST00000513621 740 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC022447.1-201ENST00000515358 464 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 NPM1P6-201ENST00000521088 871 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC063949.1-201ENST00000552900 865 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 PSMB7P1-201ENST00000556349 514 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC093249.4-201ENST00000564755 259 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC091042.1-201ENST00000579213 173 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AP001004.1-201ENST00000582468 324 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 MIR3611-201ENST00000584484 83 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC068276.1-201ENST00000605793 379 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC100793.4-201ENST00000613683 429 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC022106.2-201ENST00000620114 757 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL356266.1-201ENST00000623311 483 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AL356121.2-201ENST00000624715 780 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC025048.6-202ENST00000627667 438 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 LINC01355-201ENST00000566551 5444 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 AC107027.3-201ENST00000565095 3473 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 MTCO1P23-201ENST00000415223 1526 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 CR383658.2-201ENST00000547576 1525 ntBASIC4.67□□□□□ -1.66
PTCHD3Q3KNS1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD3Q3KNS1 AC117529.2-201ENST00000512159 2068 ntBASIC4.66□□□□□ -1.66
PTCHD3Q3KNS1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.66□□□□□ -1.66
PTCHD3Q3KNS1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PTCHD3Q3KNS1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD3Q3KNS1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms