Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFX4Q33E94 RNU6-650P-201ENST00000365658 111 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RFX4Q33E94 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.39□□□□□ -1.87
RFX4Q33E94 RNU2-37P-201ENST00000410695 177 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 RNA5SP31-201ENST00000411144 127 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 VTA1P1-201ENST00000414044 866 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 AIMP1P1-201ENST00000418670 937 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 VN1R42P-201ENST00000424651 344 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 AC005189.1-201ENST00000431286 310 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 BX679664.1-201ENST00000434429 253 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 RPL7P29-201ENST00000437151 728 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.39□□□□□ -1.87
RFX4Q33E94 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.39□□□□□ -1.87
RFX4Q33E94 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.39□□□□□ -1.87
RFX4Q33E94 CYCSP53-201ENST00000455540 265 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RFX4Q33E94 CEACAMP10-202ENST00000495431 496 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.39□□□□□ -1.87
RFX4Q33E94 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.39□□□□□ -1.87
RFX4Q33E94 AC022695.1-201ENST00000522089 237 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.39□□□□□ -1.87
RFX4Q33E94 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.39□□□□□ -1.87
RFX4Q33E94 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.39□□□□□ -1.87
RFX4Q33E94 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX4Q33E94 AC025260.1-201ENST00000548858 430 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.39□□□□□ -1.87
RFX4Q33E94 TRAV15-201ENST00000556680 249 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.39□□□□□ -1.87
RFX4Q33E94 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 MTND4LP24-201ENST00000572277 291 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.39□□□□□ -1.87
RFX4Q33E94 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.39□□□□□ -1.87
RFX4Q33E94 AC092474.3-201ENST00000603022 568 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 AC119501.1-201ENST00000603646 475 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
RFX4Q33E94 RNA5SP108-201ENST00000605921 117 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.39□□□□□ -1.87
RFX4Q33E94 AC097460.3-201ENST00000623099 442 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 AC006065.5-201ENST00000623427 349 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.39□□□□□ -1.87
RFX4Q33E94 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX4Q33E94 NMD3P1-201ENST00000439704 1488 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RFX4Q33E94 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX4Q33E94 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFX4Q33E94 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
RFX4Q33E94 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX4Q33E94 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX4Q33E94 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX4Q33E94 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX4Q33E94 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX4Q33E94 MTND5P11-201ENST00000511037 1812 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 METTL21EP-201ENST00000298105 713 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX4Q33E94 RNU6-805P-201ENST00000365643 106 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 MIR153-1-201ENST00000384914 90 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 MIR141-201ENST00000384975 95 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX4Q33E94 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.38□□□□□ -1.87
RFX4Q33E94 AL049693.1-201ENST00000402760 611 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 PTGES3P2-201ENST00000407942 482 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 RNU4-27P-201ENST00000410889 139 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 TATDN1P1-201ENST00000414123 891 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX4Q33E94 AL031736.2-201ENST00000426573 787 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RFX4Q33E94 H2AFZP6-201ENST00000444403 394 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 SETD6P1-201ENST00000444575 317 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 TPTE2P6-202ENST00000445572 1007 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC114755.5-201ENST00000447760 831 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX4Q33E94 TPMTP4-201ENST00000450749 678 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC009220.1-201ENST00000451614 275 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 RPS20P32-201ENST00000456044 356 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 RPS4XP2-201ENST00000458402 793 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX4Q33E94 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.38□□□□□ -1.87
RFX4Q33E94 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AL161747.1-201ENST00000480068 358 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX4Q33E94 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 FABP5P12-201ENST00000515543 389 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.38□□□□□ -1.87
RFX4Q33E94 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX4Q33E94 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX4Q33E94 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.38□□□□□ -1.87
RFX4Q33E94 AP006245.1-201ENST00000522549 120 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 PTP4A1P6-201ENST00000531034 478 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX4Q33E94 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX4Q33E94 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.38□□□□□ -1.87
RFX4Q33E94 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX4Q33E94 AC004024.1-201ENST00000549244 247 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AL389895.1-201ENST00000554127 252 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.38□□□□□ -1.87
RFX4Q33E94 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms