Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 OR6C71P-201ENST00000432580 913 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AC006994.1-201ENST00000438212 839 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 ISCA1P2-201ENST00000438679 421 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 IFNWP4-201ENST00000453148 294 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AC110794.1-201ENST00000505816 425 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 FTH1P9-201ENST00000513251 355 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AC027807.1-201ENST00000559921 996 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AC015917.1-201ENST00000579654 510 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AL137843.1-201ENST00000605078 385 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AL157817.1-201ENST00000614264 790 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AP006248.2-201ENST00000623309 592 ntBASIC3.98□□□□□ -1.77
RFX7Q2KHR2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX7Q2KHR2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AC024341.1-201ENST00000526444 1552 ntBASIC3.97□□□□□ -1.77
RFX7Q2KHR2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 HMGN1P24-201ENST00000412282 298 ntBASIC3.97□□□□□ -1.77
RFX7Q2KHR2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AL671855.1-201ENST00000446875 1203 ntBASIC3.97□□□□□ -1.77
RFX7Q2KHR2 HMGN1P18-201ENST00000457642 277 ntBASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AC109925.1-201ENST00000478069 331 ntBASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 AC119744.1-201ENST00000454746 1715 ntBASIC3.97□□□□□ -1.77
RFX7Q2KHR2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
RFX7Q2KHR2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AL353743.1-202ENST00000431724 1695 ntBASIC3.96□□□□□ -1.78
RFX7Q2KHR2 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 RNU1-87P-201ENST00000363727 170 ntBASIC3.96□□□□□ -1.78
RFX7Q2KHR2 SNORA62.2-201ENST00000364672 152 ntBASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AC093719.1-202ENST00000392735 373 ntBASIC3.96□□□□□ -1.78
RFX7Q2KHR2 RNA5SP239-201ENST00000410218 129 ntBASIC3.96□□□□□ -1.78
RFX7Q2KHR2 MTCO1P45-201ENST00000431457 267 ntBASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AC106872.2-201ENST00000494303 480 ntBASIC3.96□□□□□ -1.78
RFX7Q2KHR2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AC084036.1-201ENST00000609190 508 ntBASIC3.96□□□□□ -1.78
RFX7Q2KHR2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFX7Q2KHR2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFX7Q2KHR2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RFX7Q2KHR2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
RFX7Q2KHR2 XIAPP3-201ENST00000312918 795 ntBASIC3.95□□□□□ -1.78
RFX7Q2KHR2 AC011155.1-201ENST00000316512 456 ntBASIC3.95□□□□□ -1.78
RFX7Q2KHR2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RFX7Q2KHR2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RFX7Q2KHR2 TAF9BP1-201ENST00000396646 746 ntBASIC3.95□□□□□ -1.78
RFX7Q2KHR2 HMGB3P11-201ENST00000440127 604 ntBASIC3.95□□□□□ -1.78
RFX7Q2KHR2 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.95□□□□□ -1.78
RFX7Q2KHR2 FABP5P12-201ENST00000515543 389 ntBASIC3.95□□□□□ -1.78
RFX7Q2KHR2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.95□□□□□ -1.78
RFX7Q2KHR2 AC008507.1-201ENST00000587506 734 ntBASIC3.95□□□□□ -1.78
RFX7Q2KHR2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.95□□□□□ -1.78
RFX7Q2KHR2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFX7Q2KHR2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 RPL23AP57-201ENST00000332361 466 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 RPL31P12-201ENST00000422587 358 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 CST9LP2-201ENST00000437612 320 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 AP001992.1-205ENST00000462248 379 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 RN7SKP116-201ENST00000516902 319 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 IGHV3-32-201ENST00000519182 355 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.94□□□□□ -1.78
RFX7Q2KHR2 AC007424.1-203ENST00000554613 687 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 MIR4644-201ENST00000579929 84 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 MIR2682-201ENST00000580305 110 ntBASIC3.94□□□□□ -1.78
RFX7Q2KHR2 VN1R79P-201ENST00000593540 513 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms