Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 C4BPAP2-201ENST00000428434 478 ntBASIC3.16□□□□□ -1.9
USF2Q15853 COX6B1P7-201ENST00000430845 235 ntBASIC3.16□□□□□ -1.9
USF2Q15853 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.16□□□□□ -1.9
USF2Q15853 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.16□□□□□ -1.9
USF2Q15853 AC006011.1-201ENST00000442758 349 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.16□□□□□ -1.9
USF2Q15853 HSPE1P28-201ENST00000443139 211 ntBASIC3.16□□□□□ -1.9
USF2Q15853 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.16□□□□□ -1.9
USF2Q15853 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.16□□□□□ -1.9
USF2Q15853 CYCSP42-201ENST00000450823 238 ntBASIC3.16□□□□□ -1.9
USF2Q15853 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.16□□□□□ -1.9
USF2Q15853 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.16□□□□□ -1.9
USF2Q15853 RNA5SP246-201ENST00000458909 119 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AC011276.1-201ENST00000469688 323 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AC041039.1-201ENST00000485656 536 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AC006483.1-201ENST00000487308 313 ntBASIC3.16□□□□□ -1.9
USF2Q15853 RPL29P14-201ENST00000495837 428 ntBASIC3.16□□□□□ -1.9
USF2Q15853 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.16□□□□□ -1.9
USF2Q15853 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.16□□□□□ -1.9
USF2Q15853 KRT19P6-201ENST00000510983 209 ntBASIC3.16□□□□□ -1.9
USF2Q15853 RN7SKP116-201ENST00000516902 319 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AC034205.1-201ENST00000520621 638 ntBASIC3.16□□□□□ -1.9
USF2Q15853 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.16□□□□□ -1.9
USF2Q15853 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.16□□□□□ -1.9
USF2Q15853 AC090312.2-201ENST00000582687 378 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AC011492.1-201ENST00000600023 315 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AC068790.4-201ENST00000602474 263 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AC114878.2-201ENST00000604863 1251 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AL451044.1-201ENST00000604867 238 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AL365503.1-201ENST00000605247 905 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AC092354.2-201ENST00000607786 514 ntBASIC3.16□□□□□ -1.9
USF2Q15853 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.16□□□□□ -1.9
USF2Q15853 MIR378J-201ENST00000611988 109 ntBASIC3.16□□□□□ -1.9
USF2Q15853 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USF2Q15853 AL365440.1-201ENST00000436135 2167 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AP002907.1-201ENST00000606361 1430 ntBASIC3.16□□□□□ -1.9
USF2Q15853 AC116667.1-201ENST00000604855 2072 ntBASIC3.16□□□□□ -1.9
USF2Q15853 IPO8P1-201ENST00000455509 3109 ntBASIC3.16□□□□□ -1.9
USF2Q15853 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USF2Q15853 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USF2Q15853 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USF2Q15853 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.16□□□□□ -1.9
USF2Q15853 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
USF2Q15853 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
USF2Q15853 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
USF2Q15853 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
USF2Q15853 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.15□□□□□ -1.91
USF2Q15853 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
USF2Q15853 SNORD35B-201ENST00000363660 87 ntBASIC3.15□□□□□ -1.91
USF2Q15853 RNA5SP509-201ENST00000364577 119 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AL161909.1-201ENST00000397390 712 ntBASIC3.15□□□□□ -1.91
USF2Q15853 RNU4-25P-201ENST00000410569 230 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.15□□□□□ -1.91
USF2Q15853 RPL18P10-201ENST00000425606 538 ntBASIC3.15□□□□□ -1.91
USF2Q15853 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.15□□□□□ -1.91
USF2Q15853 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.15□□□□□ -1.91
USF2Q15853 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.15□□□□□ -1.91
USF2Q15853 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.15□□□□□ -1.91
USF2Q15853 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.15□□□□□ -1.91
USF2Q15853 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.15□□□□□ -1.91
USF2Q15853 DNAJC19P1-201ENST00000455312 319 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC089999.1-201ENST00000460336 374 ntBASIC3.15□□□□□ -1.91
USF2Q15853 RN7SL860P-201ENST00000473738 223 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC010301.1-201ENST00000473936 355 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC087879.1-201ENST00000474343 374 ntBASIC3.15□□□□□ -1.91
USF2Q15853 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.15□□□□□ -1.91
USF2Q15853 HPRT1P1-201ENST00000509498 657 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC093840.1-201ENST00000511599 336 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC099522.1-202ENST00000514718 367 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.15□□□□□ -1.91
USF2Q15853 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.15□□□□□ -1.91
USF2Q15853 PSMB7P1-201ENST00000556349 514 ntBASIC3.15□□□□□ -1.91
USF2Q15853 EIF5A2P1-201ENST00000564027 460 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AL133457.1-201ENST00000564251 987 ntBASIC3.15□□□□□ -1.91
USF2Q15853 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.15□□□□□ -1.91
USF2Q15853 MIR4277-201ENST00000578298 84 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC012417.1-201ENST00000582307 1039 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.15□□□□□ -1.91
USF2Q15853 AC008687.2-201ENST00000597865 520 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AL163642.2-201ENST00000604722 1019 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AL356218.2-201ENST00000605264 187 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
USF2Q15853 RMST_8.1-201ENST00000610287 165 ntBASIC3.15□□□□□ -1.91
USF2Q15853 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.15□□□□□ -1.91
USF2Q15853 UBE3AP2-201ENST00000429033 2259 ntBASIC3.15□□□□□ -1.91
USF2Q15853 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.15□□□□□ -1.91
USF2Q15853 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.15□□□□□ -1.91
USF2Q15853 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
USF2Q15853 AC002546.1-201ENST00000588041 2504 ntBASIC3.15□□□□□ -1.91
USF2Q15853 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USF2Q15853 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.14□□□□□ -1.91
USF2Q15853 AC110774.1-201ENST00000623567 2018 ntBASIC3.14□□□□□ -1.91
USF2Q15853 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.14□□□□□ -1.91
USF2Q15853 RNU4-39P-201ENST00000362455 127 ntBASIC3.14□□□□□ -1.91
USF2Q15853 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
USF2Q15853 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.14□□□□□ -1.91
USF2Q15853 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.14□□□□□ -1.91
USF2Q15853 HSFY1P1-201ENST00000423928 1178 ntBASIC3.14□□□□□ -1.91
USF2Q15853 AC016712.1-201ENST00000431088 378 ntBASIC3.14□□□□□ -1.91
USF2Q15853 BTF3P10-201ENST00000433415 495 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms