Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPL23AP92-201ENST00000603609 255 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 RFPL4AP6-201ENST00000616792 846 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH1Q08174 AC000123.2-201ENST00000623124 461 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 SNX18P12-201ENST00000624821 759 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.75□□□□□ -1.49
PCDH1Q08174 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PCDH1Q08174 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH1Q08174 AC125336.1-201ENST00000508893 2827 ntBASIC5.75□□□□□ -1.49
PCDH1Q08174 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PCDH1Q08174 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH1Q08174 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH1Q08174 AP005435.3-201ENST00000531260 3198 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH1Q08174 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH1Q08174 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH1Q08174 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH1Q08174 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
PCDH1Q08174 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCDH1Q08174 Y_RNA.367-201ENST00000365544 101 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 RNU4-20P-201ENST00000365601 151 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDH1Q08174 Y_RNA.459-201ENST00000384251 102 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 SNORA51.9-201ENST00000384295 124 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 AL583835.1-201ENST00000399570 407 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 MIR1275-201ENST00000408770 80 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDH1Q08174 OR1AA1P-201ENST00000419597 916 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH1Q08174 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDH1Q08174 RPL34P6-201ENST00000432390 345 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDH1Q08174 AL445928.1-201ENST00000435545 222 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 PNKDP1-201ENST00000435914 430 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCDH1Q08174 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH1Q08174 AL353662.1-201ENST00000439099 327 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDH1Q08174 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDH1Q08174 CFL1P4-201ENST00000451536 498 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 GEMIN2P1-201ENST00000454246 752 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 RNU6-1218P-201ENST00000458990 108 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 RN7SL269P-201ENST00000467795 305 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 AL163540.1-201ENST00000485382 386 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDH1Q08174 HSD3BP3-201ENST00000514706 994 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 RN7SKP288-201ENST00000516227 268 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 SNORA25.17-201ENST00000517184 124 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 NARSP2-201ENST00000518524 679 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 SUMO2P20-201ENST00000520803 283 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 NCAPGP2-201ENST00000557911 754 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDH1Q08174 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH1Q08174 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDH1Q08174 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH1Q08174 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDH1Q08174 GLUD1P4-201ENST00000590914 418 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 AP001330.4-201ENST00000604350 154 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 AC145423.1-201ENST00000605712 336 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 OR6R2P-201ENST00000609216 300 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 uc_338.12-201ENST00000616344 181 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH1Q08174 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH1Q08174 LINC02019-201ENST00000608605 2060 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCDH1Q08174 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH1Q08174 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDH1Q08174 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH1Q08174 AC087516.1-201ENST00000561236 2428 ntBASIC5.74□□□□□ -1.49
PCDH1Q08174 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
PCDH1Q08174 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH1Q08174 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH1Q08174 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PCDH1Q08174 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH1Q08174 AL161756.3-201ENST00000641216 2071 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH1Q08174 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH1Q08174 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH1Q08174 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDH1Q08174 Y_RNA.146-201ENST00000363549 102 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 RNU1-65P-201ENST00000363919 148 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 REREP1Y-201ENST00000422655 198 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AL590399.2-201ENST00000427536 309 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AL121776.1-201ENST00000429337 372 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AL590233.1-201ENST00000430017 456 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 OR4K11P-201ENST00000431829 904 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDH1Q08174 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDH1Q08174 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDH1Q08174 RPS12P17-201ENST00000438591 377 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 REREP2Y-201ENST00000439103 200 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 AC093156.1-201ENST00000440382 670 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDH1Q08174 RPL5P22-201ENST00000480199 884 ntBASIC5.73□□□□□ -1.49
PCDH1Q08174 RPL38P3-201ENST00000484463 213 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms