Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 TPT1P12-201ENST00000448968 492 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 ISCUP1-201ENST00000454451 448 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 RPL30P9-201ENST00000465586 330 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AC074051.3-201ENST00000570238 358 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 KPNA2P3-201ENST00000584190 848 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 ELOCP28-201ENST00000590044 317 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 RNU6-88P-201ENST00000606801 100 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 MIR378J-201ENST00000611988 109 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AC025594.3-201ENST00000613068 790 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AC099842.1-201ENST00000619919 596 ntBASIC5.08□□□□□ -1.6
CDC42EP1Q00587 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDC42EP1Q00587 AC107081.3-201ENST00000612715 2034 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC026951.1-201ENST00000559530 2459 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 MTND4P26-201ENST00000415971 1359 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC026523.2-201ENST00000625039 7739 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC021146.4-201ENST00000309229 279 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 SNRPEP3-201ENST00000338402 276 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 RNU5F-7P-201ENST00000363696 115 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 RNA5SP447-201ENST00000363749 119 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 RNY3P10-201ENST00000384764 102 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC136624.1-201ENST00000400791 413 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC004022.2-201ENST00000413824 193 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AL356387.2-201ENST00000422272 243 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AL953862.1-201ENST00000423016 168 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 RPS3AP44-201ENST00000425466 790 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 LARP1BP3-201ENST00000437229 869 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC092427.1-201ENST00000439177 601 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 MTCO1P48-201ENST00000448024 1096 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 RPS23P7-201ENST00000466210 444 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC090686.1-201ENST00000481577 749 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC020890.1-201ENST00000491837 504 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AL117351.2-201ENST00000513571 157 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 DEFB131D-201ENST00000526803 184 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 GTF2IP22-201ENST00000554443 182 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 CYCSP2-201ENST00000558168 301 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC007599.1-201ENST00000568688 1174 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC068276.1-201ENST00000605793 379 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC087752.4-201ENST00000605911 462 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC004492.1-201ENST00000607036 742 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC010678.1-201ENST00000614118 713 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 PABPC1P9-201ENST00000426076 1612 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.07□□□□□ -1.6
CDC42EP1Q00587 AC139713.2-214ENST00000642059 1811 ntBASIC5.07□□□□□ -1.6
CDC42EP1Q00587 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42EP1Q00587 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDC42EP1Q00587 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CDC42EP1Q00587 RAD17P1-201ENST00000418130 2042 ntBASIC5.06□□□□□ -1.6
CDC42EP1Q00587 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms