Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A1P61619 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.08□□□□□ -1.76
SEC61A1P61619 ATP1B1P1-201ENST00000509767 915 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.08□□□□□ -1.76
SEC61A1P61619 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.08□□□□□ -1.76
SEC61A1P61619 CDH12P4-201ENST00000517835 295 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 CDH12P3-201ENST00000517935 295 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 CDH12P1-201ENST00000518435 295 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AC106038.2-201ENST00000520706 568 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SEC61A1P61619 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.08□□□□□ -1.76
SEC61A1P61619 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AC069240.1-201ENST00000548774 375 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 DYNLL1P4-201ENST00000549314 266 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AC063949.1-201ENST00000552900 865 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.08□□□□□ -1.76
SEC61A1P61619 UBE2FP2-201ENST00000566646 462 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 TVP23CP2-201ENST00000571473 623 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AC110743.1-201ENST00000584870 478 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AC128687.1-201ENST00000605304 619 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AL021997.1-201ENST00000605757 193 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AC239868.4-201ENST00000608318 671 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AC006338.2-201ENST00000616864 791 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AL022401.1-201ENST00000619498 108 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AL031667.3-201ENST00000620124 655 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SEC61A1P61619 AL359715.5-201ENST00000623431 443 ntBASIC4.08□□□□□ -1.76
SEC61A1P61619 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SEC61A1P61619 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SEC61A1P61619 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SEC61A1P61619 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SEC61A1P61619 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 AC092162.3-201ENST00000624511 1624 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SEC61A1P61619 RNU6-500P-201ENST00000362349 107 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 Y_RNA.359-201ENST00000365498 102 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SEC61A1P61619 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 RNU2-65P-201ENST00000410162 185 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 RN7SKP216-201ENST00000411050 312 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 GSTM3P2-201ENST00000412746 530 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AL450992.3-201ENST00000413192 568 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.07□□□□□ -1.76
SEC61A1P61619 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.07□□□□□ -1.76
SEC61A1P61619 SKP1P3-201ENST00000429280 487 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.07□□□□□ -1.76
SEC61A1P61619 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A1P61619 YWHAZP8-201ENST00000436935 731 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.07□□□□□ -1.76
SEC61A1P61619 AC000111.2-201ENST00000448200 210 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.07□□□□□ -1.76
SEC61A1P61619 FGF7P3-201ENST00000454645 303 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 RNU6-956P-201ENST00000458868 103 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC008897.1-201ENST00000494006 347 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC004069.2-201ENST00000505438 1114 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 RPL7L1P13-201ENST00000511702 739 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 RNY4P37-201ENST00000516225 96 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 RNA5SP228-201ENST00000516232 133 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.07□□□□□ -1.76
SEC61A1P61619 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A1P61619 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 AC100770.1-201ENST00000532310 322 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AP001880.2-201ENST00000538233 448 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.07□□□□□ -1.76
SEC61A1P61619 AC137768.1-201ENST00000549998 553 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.07□□□□□ -1.76
SEC61A1P61619 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.07□□□□□ -1.76
SEC61A1P61619 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.07□□□□□ -1.76
SEC61A1P61619 AC012414.6-201ENST00000568241 401 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AP005119.2-201ENST00000579735 1105 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A1P61619 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.07□□□□□ -1.76
SEC61A1P61619 VN1R84P-201ENST00000593697 235 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AL390838.2-201ENST00000602394 274 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC073648.5-201ENST00000603502 305 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC107304.1-201ENST00000604229 296 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC092354.2-201ENST00000607786 514 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A1P61619 AL356266.1-201ENST00000623311 483 ntBASIC4.07□□□□□ -1.76
SEC61A1P61619 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.07□□□□□ -1.76
SEC61A1P61619 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A1P61619 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A1P61619 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.07□□□□□ -1.76
SEC61A1P61619 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SEC61A1P61619 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms