Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.54□□□□□ -2
CKS1BP61024 OSTCP5-201ENST00000425293 453 ntBASIC2.54□□□□□ -2
CKS1BP61024 AC006989.1-201ENST00000427212 131 ntBASIC2.54□□□□□ -2
CKS1BP61024 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.54□□□□□ -2
CKS1BP61024 PSMA2P3-201ENST00000429685 675 ntBASIC2.54□□□□□ -2
CKS1BP61024 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.54□□□□□ -2
CKS1BP61024 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC2.54□□□□□ -2
CKS1BP61024 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.54□□□□□ -2
CKS1BP61024 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.54□□□□□ -2
CKS1BP61024 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.54□□□□□ -2
CKS1BP61024 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC2.54□□□□□ -2
CKS1BP61024 RPL23AP20-201ENST00000447965 421 ntBASIC2.54□□□□□ -2
CKS1BP61024 AC006480.1-201ENST00000449887 378 ntBASIC2.54□□□□□ -2
CKS1BP61024 AC099563.1-201ENST00000456086 418 ntBASIC2.54□□□□□ -2
CKS1BP61024 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.54□□□□□ -2
CKS1BP61024 AC104472.2-201ENST00000469035 601 ntBASIC2.54□□□□□ -2
CKS1BP61024 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.54□□□□□ -2
CKS1BP61024 AC091167.1-201ENST00000492017 396 ntBASIC2.54□□□□□ -2
CKS1BP61024 AL024509.2-201ENST00000493462 493 ntBASIC2.54□□□□□ -2
CKS1BP61024 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC2.54□□□□□ -2
CKS1BP61024 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC2.54□□□□□ -2
CKS1BP61024 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.54□□□□□ -2
CKS1BP61024 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.54□□□□□ -2
CKS1BP61024 OR4R3P-201ENST00000525084 838 ntBASIC2.54□□□□□ -2
CKS1BP61024 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.54□□□□□ -2
CKS1BP61024 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.54□□□□□ -2
CKS1BP61024 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CKS1BP61024 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.54□□□□□ -2
CKS1BP61024 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.54□□□□□ -2
CKS1BP61024 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.54□□□□□ -2
CKS1BP61024 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.54□□□□□ -2
CKS1BP61024 AC006116.5-201ENST00000591936 559 ntBASIC2.54□□□□□ -2
CKS1BP61024 RNU4-89P-201ENST00000607443 133 ntBASIC2.54□□□□□ -2
CKS1BP61024 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.54□□□□□ -2
CKS1BP61024 AL359198.2-201ENST00000611836 194 ntBASIC2.54□□□□□ -2
CKS1BP61024 AC004696.1-201ENST00000614345 607 ntBASIC2.54□□□□□ -2
CKS1BP61024 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.54□□□□□ -2
CKS1BP61024 FAM157B-203ENST00000639350 358 ntBASIC2.54□□□□□ -2
CKS1BP61024 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CKS1BP61024 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.54□□□□□ -2
CKS1BP61024 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CKS1BP61024 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CKS1BP61024 AC012618.3-205ENST00000637896 1496 ntBASIC2.53□□□□□ -2
CKS1BP61024 Z83843.1-201ENST00000604070 3685 ntBASIC2.53□□□□□ -2
CKS1BP61024 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CKS1BP61024 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CKS1BP61024 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.53□□□□□ -2
CKS1BP61024 RNVU1-6-201ENST00000364688 164 ntBASIC2.53□□□□□ -2
CKS1BP61024 AC068538.1-201ENST00000376856 336 ntBASIC2.53□□□□□ -2
CKS1BP61024 MIR199A2-201ENST00000385289 110 ntBASIC2.53□□□□□ -2
CKS1BP61024 RNU4-6P-201ENST00000410804 122 ntBASIC2.53□□□□□ -2
CKS1BP61024 RN7SKP33-201ENST00000410942 340 ntBASIC2.53□□□□□ -2
CKS1BP61024 RNA5SP31-201ENST00000411144 127 ntBASIC2.53□□□□□ -2
CKS1BP61024 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.53□□□□□ -2
CKS1BP61024 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.53□□□□□ -2
CKS1BP61024 AC023141.6-201ENST00000429418 337 ntBASIC2.53□□□□□ -2
CKS1BP61024 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC2.53□□□□□ -2
CKS1BP61024 RPL23AP58-201ENST00000440453 469 ntBASIC2.53□□□□□ -2
CKS1BP61024 AC069540.1-201ENST00000446320 988 ntBASIC2.53□□□□□ -2
CKS1BP61024 TPT1P13-201ENST00000449760 499 ntBASIC2.53□□□□□ -2
CKS1BP61024 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.53□□□□□ -2
CKS1BP61024 AC084198.1-201ENST00000477747 402 ntBASIC2.53□□□□□ -2
CKS1BP61024 ACTG1P13-201ENST00000486987 1043 ntBASIC2.53□□□□□ -2
CKS1BP61024 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.53□□□□□ -2
CKS1BP61024 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.53□□□□□ -2
CKS1BP61024 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.53□□□□□ -2
CKS1BP61024 RNA5SP468-201ENST00000516782 93 ntBASIC2.53□□□□□ -2
CKS1BP61024 IGKV2D-10-201ENST00000520194 281 ntBASIC2.53□□□□□ -2
CKS1BP61024 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC2.53□□□□□ -2
CKS1BP61024 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.53□□□□□ -2
CKS1BP61024 OR5AP1P-201ENST00000529730 940 ntBASIC2.53□□□□□ -2
CKS1BP61024 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.53□□□□□ -2
CKS1BP61024 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.53□□□□□ -2
CKS1BP61024 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.53□□□□□ -2
CKS1BP61024 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.53□□□□□ -2
CKS1BP61024 AC006960.3-201ENST00000561845 705 ntBASIC2.53□□□□□ -2
CKS1BP61024 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC2.53□□□□□ -2
CKS1BP61024 MIR4277-201ENST00000578298 84 ntBASIC2.53□□□□□ -2
CKS1BP61024 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.53□□□□□ -2
CKS1BP61024 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.53□□□□□ -2
CKS1BP61024 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.53□□□□□ -2
CKS1BP61024 KLKP1-201ENST00000595979 403 ntBASIC2.53□□□□□ -2
CKS1BP61024 AC096947.1-201ENST00000603233 470 ntBASIC2.53□□□□□ -2
CKS1BP61024 RPL23AP88-201ENST00000605759 454 ntBASIC2.53□□□□□ -2
CKS1BP61024 SNORA35B-201ENST00000607417 129 ntBASIC2.53□□□□□ -2
CKS1BP61024 AC007342.8-201ENST00000623278 678 ntBASIC2.53□□□□□ -2
CKS1BP61024 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.53□□□□□ -2
CKS1BP61024 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.53□□□□□ -2
CKS1BP61024 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CKS1BP61024 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS1BP61024 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS1BP61024 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CKS1BP61024 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CKS1BP61024 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CKS1BP61024 RNA5SP424-201ENST00000390988 115 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 RNU4-65P-201ENST00000410473 140 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 RPL19P1-201ENST00000411635 428 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 HMGB3P20-201ENST00000417997 600 ntBASIC2.52□□□□□ -2.01
CKS1BP61024 RPS27AP7-201ENST00000422792 455 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms