Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNU6-751P-201ENST00000516382 101 ntBASIC3.72□□□□□ -1.81
CDH6P55285 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH6P55285 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
CDH6P55285 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH6P55285 MTATP6P25-201ENST00000574491 261 ntBASIC3.72□□□□□ -1.81
CDH6P55285 AL020997.2-201ENST00000602607 184 ntBASIC3.72□□□□□ -1.81
CDH6P55285 AC011374.2-201ENST00000607135 526 ntBASIC3.72□□□□□ -1.81
CDH6P55285 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH6P55285 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH6P55285 AC138649.5-201ENST00000637456 137 ntBASIC3.72□□□□□ -1.81
CDH6P55285 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH6P55285 HSPA8P1-201ENST00000425843 1833 ntBASIC3.72□□□□□ -1.81
CDH6P55285 SEPT7P7-201ENST00000420492 1301 ntBASIC3.71□□□□□ -1.81
CDH6P55285 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.81
CDH6P55285 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.71□□□□□ -1.81
CDH6P55285 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH6P55285 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH6P55285 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH6P55285 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH6P55285 SNORA70E-201ENST00000384492 135 ntBASIC3.71□□□□□ -1.82
CDH6P55285 U3.39-201ENST00000408569 239 ntBASIC3.71□□□□□ -1.82
CDH6P55285 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH6P55285 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH6P55285 AL365396.1-201ENST00000430854 671 ntBASIC3.71□□□□□ -1.82
CDH6P55285 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH6P55285 AL035246.1-201ENST00000433554 1255 ntBASIC3.71□□□□□ -1.82
CDH6P55285 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH6P55285 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH6P55285 AL138799.3-201ENST00000438968 350 ntBASIC3.71□□□□□ -1.82
CDH6P55285 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH6P55285 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.71□□□□□ -1.82
CDH6P55285 AC078785.3-201ENST00000476607 425 ntBASIC3.71□□□□□ -1.82
CDH6P55285 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.71□□□□□ -1.82
CDH6P55285 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH6P55285 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH6P55285 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH6P55285 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH6P55285 AP000926.4-201ENST00000527351 454 ntBASIC3.71□□□□□ -1.82
CDH6P55285 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH6P55285 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH6P55285 CYP2C60P-201ENST00000566088 139 ntBASIC3.71□□□□□ -1.82
CDH6P55285 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH6P55285 AC112230.1-201ENST00000604342 547 ntBASIC3.71□□□□□ -1.82
CDH6P55285 AC018618.2-201ENST00000604770 446 ntBASIC3.71□□□□□ -1.82
CDH6P55285 AC079610.2-201ENST00000604818 690 ntBASIC3.71□□□□□ -1.82
CDH6P55285 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH6P55285 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH6P55285 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH6P55285 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH6P55285 AC007823.1-201ENST00000569932 1566 ntBASIC3.71□□□□□ -1.82
CDH6P55285 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH6P55285 ZNF90P1-201ENST00000480493 1951 ntBASIC3.71□□□□□ -1.82
CDH6P55285 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH6P55285 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CDH6P55285 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH6P55285 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CDH6P55285 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH6P55285 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH6P55285 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH6P55285 AL021368.2-201ENST00000606125 5352 ntBASIC3.7□□□□□ -1.82
CDH6P55285 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH6P55285 Y_RNA.126-201ENST00000363382 111 ntBASIC3.7□□□□□ -1.82
CDH6P55285 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH6P55285 AL136116.1-201ENST00000403591 381 ntBASIC3.7□□□□□ -1.82
CDH6P55285 ATP5A1P2-201ENST00000412323 255 ntBASIC3.7□□□□□ -1.82
CDH6P55285 RPL36AP36-201ENST00000418616 301 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AL035423.1-201ENST00000420331 213 ntBASIC3.7□□□□□ -1.82
CDH6P55285 MTND4LP14-201ENST00000429447 288 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AL445584.1-201ENST00000431451 330 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AC009263.1-201ENST00000441193 1239 ntBASIC3.7□□□□□ -1.82
CDH6P55285 RSL24D1P2-201ENST00000445584 366 ntBASIC3.7□□□□□ -1.82
CDH6P55285 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
CDH6P55285 RPS20P32-201ENST00000456044 356 ntBASIC3.7□□□□□ -1.82
CDH6P55285 RPL7P15-201ENST00000461190 712 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH6P55285 RNU2-27P-201ENST00000516185 142 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH6P55285 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH6P55285 MTND5P21-201ENST00000531961 522 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AC074029.1-201ENST00000552531 1044 ntBASIC3.7□□□□□ -1.82
CDH6P55285 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH6P55285 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH6P55285 AL034351.1-201ENST00000605288 668 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AC005972.3-201ENST00000606304 481 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH6P55285 AL391261.4-201ENST00000616012 481 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AC069209.1-201ENST00000619282 651 ntBASIC3.7□□□□□ -1.82
CDH6P55285 AC006065.5-201ENST00000623427 349 ntBASIC3.7□□□□□ -1.82
CDH6P55285 U6.98-201ENST00000637157 84 ntBASIC3.7□□□□□ -1.82
CDH6P55285 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH6P55285 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH6P55285 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH6P55285 AC068647.1-201ENST00000489539 2265 ntBASIC3.69□□□□□ -1.82
CDH6P55285 AF127577.6-201ENST00000623352 2191 ntBASIC3.69□□□□□ -1.82
CDH6P55285 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDH6P55285 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH6P55285 GABPAP-201ENST00000419271 1356 ntBASIC3.69□□□□□ -1.82
CDH6P55285 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH6P55285 MIR423-201ENST00000362201 94 ntBASIC3.69□□□□□ -1.82
CDH6P55285 SNORD9-201ENST00000362566 104 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms