Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC092354.2-201ENST00000607786 514 ntBASIC4.17□□□□□ -1.74
VCPP55072 AL513477.2-201ENST00000607858 568 ntBASIC4.17□□□□□ -1.74
VCPP55072 AL512506.1-201ENST00000613918 449 ntBASIC4.17□□□□□ -1.74
VCPP55072 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.17□□□□□ -1.74
VCPP55072 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.17□□□□□ -1.74
VCPP55072 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VCPP55072 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
VCPP55072 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VCPP55072 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VCPP55072 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VCPP55072 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.17□□□□□ -1.74
VCPP55072 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VCPP55072 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VCPP55072 AL512283.1-201ENST00000606756 1384 ntBASIC4.16□□□□□ -1.74
VCPP55072 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VCPP55072 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VCPP55072 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VCPP55072 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VCPP55072 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VCPP55072 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VCPP55072 SNORA60-201ENST00000362396 134 ntBASIC4.16□□□□□ -1.74
VCPP55072 AL590290.1-201ENST00000405336 380 ntBASIC4.16□□□□□ -1.74
VCPP55072 MIR1251-201ENST00000408552 70 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC245052.5-201ENST00000416320 649 ntBASIC4.16□□□□□ -1.74
VCPP55072 ELOCP6-201ENST00000429066 328 ntBASIC4.16□□□□□ -1.74
VCPP55072 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.16□□□□□ -1.74
VCPP55072 PTP4A1P3-201ENST00000433661 420 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.16□□□□□ -1.74
VCPP55072 HSPD1P21-201ENST00000436541 245 ntBASIC4.16□□□□□ -1.74
VCPP55072 RPL7P28-201ENST00000437739 740 ntBASIC4.16□□□□□ -1.74
VCPP55072 PPIAP17-201ENST00000438507 471 ntBASIC4.16□□□□□ -1.74
VCPP55072 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.16□□□□□ -1.74
VCPP55072 EXTL2P1-201ENST00000446218 416 ntBASIC4.16□□□□□ -1.74
VCPP55072 RPL23AP23-201ENST00000452590 471 ntBASIC4.16□□□□□ -1.74
VCPP55072 ELOCP12-201ENST00000458706 328 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.16□□□□□ -1.74
VCPP55072 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.16□□□□□ -1.74
VCPP55072 RPL23AP73-201ENST00000492507 471 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.16□□□□□ -1.74
VCPP55072 AC008628.1-201ENST00000508663 265 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC104619.4-201ENST00000510773 249 ntBASIC4.16□□□□□ -1.74
VCPP55072 RNU6-1102P-201ENST00000516149 96 ntBASIC4.16□□□□□ -1.74
VCPP55072 RN7SKP57-201ENST00000517248 293 ntBASIC4.16□□□□□ -1.74
VCPP55072 IGKV2-36-201ENST00000519999 223 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VCPP55072 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VCPP55072 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.16□□□□□ -1.74
VCPP55072 AC025918.2-201ENST00000558683 763 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.16□□□□□ -1.74
VCPP55072 AC087499.8-201ENST00000578406 226 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC015911.5-201ENST00000587076 451 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.16□□□□□ -1.74
VCPP55072 ZNF92P2-201ENST00000600543 1059 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.16□□□□□ -1.74
VCPP55072 AC015726.1-201ENST00000602353 681 ntBASIC4.16□□□□□ -1.74
VCPP55072 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.16□□□□□ -1.74
VCPP55072 AC110792.4-201ENST00000609843 298 ntBASIC4.16□□□□□ -1.74
VCPP55072 AL445493.3-201ENST00000619568 477 ntBASIC4.16□□□□□ -1.74
VCPP55072 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.16□□□□□ -1.74
VCPP55072 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VCPP55072 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VCPP55072 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.16□□□□□ -1.74
VCPP55072 IPO8P1-201ENST00000455509 3109 ntBASIC4.16□□□□□ -1.74
VCPP55072 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
VCPP55072 DCAF13P1-201ENST00000495256 1330 ntBASIC4.16□□□□□ -1.74
VCPP55072 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.16□□□□□ -1.74
VCPP55072 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VCPP55072 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.15□□□□□ -1.74
VCPP55072 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VCPP55072 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VCPP55072 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VCPP55072 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VCPP55072 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VCPP55072 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.15□□□□□ -1.75
VCPP55072 Y_RNA.500-201ENST00000384466 111 ntBASIC4.15□□□□□ -1.75
VCPP55072 SNORD3H-201ENST00000384486 214 ntBASIC4.15□□□□□ -1.75
VCPP55072 AC010385.1-201ENST00000412374 256 ntBASIC4.15□□□□□ -1.75
VCPP55072 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.15□□□□□ -1.75
VCPP55072 OR4F13P-201ENST00000428478 931 ntBASIC4.15□□□□□ -1.75
VCPP55072 ATP5HP2-201ENST00000433885 485 ntBASIC4.15□□□□□ -1.75
VCPP55072 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.15□□□□□ -1.75
VCPP55072 HMGB1P16-201ENST00000447155 540 ntBASIC4.15□□□□□ -1.75
VCPP55072 NPM1P17-201ENST00000479221 602 ntBASIC4.15□□□□□ -1.75
VCPP55072 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.15□□□□□ -1.75
VCPP55072 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.15□□□□□ -1.75
VCPP55072 AC110792.2-201ENST00000510278 224 ntBASIC4.15□□□□□ -1.75
VCPP55072 RNU6-467P-201ENST00000517027 110 ntBASIC4.15□□□□□ -1.75
VCPP55072 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.15□□□□□ -1.75
VCPP55072 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.15□□□□□ -1.75
VCPP55072 AP003049.1-201ENST00000529418 457 ntBASIC4.15□□□□□ -1.75
VCPP55072 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.15□□□□□ -1.75
VCPP55072 AL136520.1-202ENST00000555494 763 ntBASIC4.15□□□□□ -1.75
VCPP55072 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.15□□□□□ -1.75
VCPP55072 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.15□□□□□ -1.75
VCPP55072 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.15□□□□□ -1.75
VCPP55072 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VCPP55072 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VCPP55072 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.15□□□□□ -1.75
VCPP55072 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VCPP55072 EXOC5P1-201ENST00000510543 1969 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms