Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC245036.5-201ENST00000596330 847 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AP000255.1-201ENST00000610276 676 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CLCN3P51790 AC093783.1-201ENST00000612976 329 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC105227.2-201ENST00000615075 605 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC011330.2-201ENST00000621680 635 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AC004777.1-201ENST00000624317 287 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCN3P51790 LINC02211-204ENST00000642024 1070 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 MTND4P8-201ENST00000514997 1362 ntBASIC4.48□□□□□ -1.69
CLCN3P51790 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CLCN3P51790 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCN3P51790 AC000123.3-201ENST00000624029 4975 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CLCN3P51790 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLCN3P51790 AC007529.1-201ENST00000418574 2178 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AC016588.2-201ENST00000632484 3021 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLCN3P51790 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLCN3P51790 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
CLCN3P51790 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLCN3P51790 AC119751.3-201ENST00000399720 670 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCN3P51790 SFR1P1-201ENST00000403720 688 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 RNA5SP146-201ENST00000410743 123 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 CYCSP19-201ENST00000411715 316 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 RPL22P18-201ENST00000417197 377 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 CYCSP10-201ENST00000417973 294 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 PAICSP7-201ENST00000419829 962 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 RAC1P8-201ENST00000427086 527 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCN3P51790 AC023347.2-201ENST00000433994 462 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AC084290.1-201ENST00000434995 374 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCN3P51790 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCN3P51790 HMGB1P48-201ENST00000446155 598 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 Z83846.1-201ENST00000446798 265 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCN3P51790 AC005008.1-201ENST00000456151 612 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 MTND6P6-201ENST00000478031 263 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 UBA52P3-201ENST00000491303 382 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCN3P51790 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCN3P51790 SAP18P1-201ENST00000512058 390 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 RNU1-45P-201ENST00000517191 141 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 MRPS36P3-201ENST00000519284 130 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCN3P51790 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLCN3P51790 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCN3P51790 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCN3P51790 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCN3P51790 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCN3P51790 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCN3P51790 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCN3P51790 BNIP3P24-201ENST00000593398 557 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AC008751.2-201ENST00000597885 980 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCN3P51790 AC021749.1-201ENST00000604322 607 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 AC099669.2-201ENST00000616549 437 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLCN3P51790 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLCN3P51790 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CLCN3P51790 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCN3P51790 DBF4P1-201ENST00000412976 1892 ntBASIC4.47□□□□□ -1.69
CLCN3P51790 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.47□□□□□ -1.69
CLCN3P51790 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCN3P51790 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.46□□□□□ -1.69
CLCN3P51790 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CLCN3P51790 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CLCN3P51790 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLCN3P51790 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLCN3P51790 HMGB1P5-201ENST00000255320 642 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCN3P51790 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLCN3P51790 RNU4-92P-201ENST00000363783 136 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 Y_RNA.472-201ENST00000384322 102 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 HDGFP1-201ENST00000405943 252 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 HNRNPDP2-201ENST00000406475 478 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 RN7SKP202-201ENST00000410439 330 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 PGBD4P8-201ENST00000412993 562 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCN3P51790 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCN3P51790 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCN3P51790 IPMKP1-201ENST00000425988 855 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 HIGD1AP12-201ENST00000427832 281 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCN3P51790 EEF1A1P39-201ENST00000440791 250 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 AC004865.1-201ENST00000442276 1003 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.46□□□□□ -1.7
CLCN3P51790 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCN3P51790 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCN3P51790 RAD23BP3-201ENST00000454157 1152 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 RPL30P11-201ENST00000495304 339 ntBASIC4.46□□□□□ -1.7
CLCN3P51790 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.46□□□□□ -1.7
CLCN3P51790 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms