Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.87□□□□□ -1.79
CASP4P49662 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CASP4P49662 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.87□□□□□ -1.79
CASP4P49662 CYP2C60P-201ENST00000566088 139 ntBASIC3.87□□□□□ -1.79
CASP4P49662 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CASP4P49662 MIR3922-201ENST00000585192 84 ntBASIC3.87□□□□□ -1.79
CASP4P49662 AC110741.2-201ENST00000605278 268 ntBASIC3.87□□□□□ -1.79
CASP4P49662 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.87□□□□□ -1.79
CASP4P49662 AL034408.1-202ENST00000636088 415 ntBASIC3.87□□□□□ -1.79
CASP4P49662 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CASP4P49662 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CASP4P49662 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.87□□□□□ -1.79
CASP4P49662 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CASP4P49662 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 AC025125.1-201ENST00000624743 1922 ntBASIC3.86□□□□□ -1.79
CASP4P49662 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CASP4P49662 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 FRG1CP-201ENST00000358464 769 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AL359837.1-201ENST00000381357 287 ntBASIC3.86□□□□□ -1.79
CASP4P49662 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CASP4P49662 AL356057.1-202ENST00000402263 756 ntBASIC3.86□□□□□ -1.79
CASP4P49662 UBE2V1P11-201ENST00000411559 285 ntBASIC3.86□□□□□ -1.79
CASP4P49662 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.86□□□□□ -1.79
CASP4P49662 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.86□□□□□ -1.79
CASP4P49662 AC007967.1-201ENST00000455422 1159 ntBASIC3.86□□□□□ -1.79
CASP4P49662 RN7SKP13-201ENST00000515933 244 ntBASIC3.86□□□□□ -1.79
CASP4P49662 SNORA70.14-201ENST00000516205 110 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.86□□□□□ -1.79
CASP4P49662 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.86□□□□□ -1.79
CASP4P49662 AC008562.1-201ENST00000521763 330 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.86□□□□□ -1.79
CASP4P49662 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CASP4P49662 AC026333.2-201ENST00000542164 106 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AC093014.1-201ENST00000548926 724 ntBASIC3.86□□□□□ -1.79
CASP4P49662 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.86□□□□□ -1.79
CASP4P49662 AGGF1P8-201ENST00000562979 1000 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AC090751.1-201ENST00000566966 267 ntBASIC3.86□□□□□ -1.79
CASP4P49662 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.86□□□□□ -1.79
CASP4P49662 AC040174.2-201ENST00000602701 465 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AC010591.1-201ENST00000603941 649 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AC069209.1-201ENST00000619282 651 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AC022149.2-201ENST00000621061 203 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AL357559.1-201ENST00000622228 274 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AC112200.1-201ENST00000625015 234 ntBASIC3.86□□□□□ -1.79
CASP4P49662 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 CEP170P1-201ENST00000502249 4587 ntBASIC3.86□□□□□ -1.79
CASP4P49662 AL122126.1-201ENST00000546905 1318 ntBASIC3.86□□□□□ -1.79
CASP4P49662 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.86□□□□□ -1.79
CASP4P49662 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CASP4P49662 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.86□□□□□ -1.79
CASP4P49662 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
CASP4P49662 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.85□□□□□ -1.79
CASP4P49662 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 AL136116.1-201ENST00000403591 381 ntBASIC3.85□□□□□ -1.79
CASP4P49662 HNRNPDP2-201ENST00000406475 478 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AL353692.2-201ENST00000407054 335 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.85□□□□□ -1.79
CASP4P49662 AMD1P2-201ENST00000412936 992 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 AC091286.1-201ENST00000431233 461 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.85□□□□□ -1.79
CASP4P49662 AC069540.1-201ENST00000446320 988 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.85□□□□□ -1.79
CASP4P49662 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.85□□□□□ -1.79
CASP4P49662 MTND2P6-201ENST00000455337 1030 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AC005726.1-201ENST00000494679 427 ntBASIC3.85□□□□□ -1.79
CASP4P49662 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.85□□□□□ -1.79
CASP4P49662 NDUFB4P9-201ENST00000511646 388 ntBASIC3.85□□□□□ -1.79
CASP4P49662 RN7SKP18-201ENST00000516005 275 ntBASIC3.85□□□□□ -1.79
CASP4P49662 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.85□□□□□ -1.79
CASP4P49662 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.85□□□□□ -1.79
CASP4P49662 CIR1P1-201ENST00000524055 1133 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AC091515.1-201ENST00000548110 679 ntBASIC3.85□□□□□ -1.79
CASP4P49662 DUXAP6-201ENST00000553858 601 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AC025918.2-201ENST00000558683 763 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AC009101.1-201ENST00000568135 242 ntBASIC3.85□□□□□ -1.79
CASP4P49662 AC067852.3-201ENST00000589177 561 ntBASIC3.85□□□□□ -1.79
CASP4P49662 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CASP4P49662 AC020914.6-201ENST00000594327 272 ntBASIC3.85□□□□□ -1.79
CASP4P49662 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.85□□□□□ -1.79
CASP4P49662 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CASP4P49662 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CASP4P49662 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CASP4P49662 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CASP4P49662 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms