Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ANP32BP2-201ENST00000454525 545 ntBASIC3.38□□□□□ -1.87
CENPFP49454 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.38□□□□□ -1.87
CENPFP49454 PRDX3P4-201ENST00000470828 747 ntBASIC3.38□□□□□ -1.87
CENPFP49454 RNU1-143P-201ENST00000516296 146 ntBASIC3.38□□□□□ -1.87
CENPFP49454 PRELID3BP8-201ENST00000604148 295 ntBASIC3.38□□□□□ -1.87
CENPFP49454 U1.23-201ENST00000610293 146 ntBASIC3.38□□□□□ -1.87
CENPFP49454 RNU1-68P-201ENST00000615382 146 ntBASIC3.38□□□□□ -1.87
CENPFP49454 U1.39-201ENST00000621562 146 ntBASIC3.38□□□□□ -1.87
CENPFP49454 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC3.38□□□□□ -1.87
CENPFP49454 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CENPFP49454 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CENPFP49454 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.38□□□□□ -1.87
CENPFP49454 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CENPFP49454 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CENPFP49454 TCP1P3-201ENST00000414406 1498 ntBASIC3.38□□□□□ -1.87
CENPFP49454 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.38□□□□□ -1.87
CENPFP49454 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CENPFP49454 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.38□□□□□ -1.87
CENPFP49454 RPS4XP22-201ENST00000480755 780 ntBASIC3.38□□□□□ -1.87
CENPFP49454 AC104687.1-201ENST00000485829 412 ntBASIC3.38□□□□□ -1.87
CENPFP49454 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.38□□□□□ -1.87
CENPFP49454 AL034351.1-201ENST00000605288 668 ntBASIC3.38□□□□□ -1.87
CENPFP49454 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CENPFP49454 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CENPFP49454 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.37□□□□□ -1.87
CENPFP49454 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.37□□□□□ -1.87
CENPFP49454 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.37□□□□□ -1.87
CENPFP49454 MIR196B-201ENST00000384852 84 ntBASIC3.37□□□□□ -1.87
CENPFP49454 IFNNP1-201ENST00000429219 553 ntBASIC3.37□□□□□ -1.87
CENPFP49454 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.37□□□□□ -1.87
CENPFP49454 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.37□□□□□ -1.87
CENPFP49454 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.37□□□□□ -1.87
CENPFP49454 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CENPFP49454 AC114781.4-201ENST00000513707 639 ntBASIC3.37□□□□□ -1.87
CENPFP49454 AC124856.1-201ENST00000600819 896 ntBASIC3.37□□□□□ -1.87
CENPFP49454 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.37□□□□□ -1.87
CENPFP49454 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CENPFP49454 MAPK10-362ENST00000641864 4484 ntBASIC3.37□□□□□ -1.87
CENPFP49454 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CENPFP49454 U3.23-201ENST00000391132 200 ntBASIC3.37□□□□□ -1.87
CENPFP49454 CST9LP2-201ENST00000437612 320 ntBASIC3.37□□□□□ -1.87
CENPFP49454 RPL23AP67-201ENST00000465341 474 ntBASIC3.37□□□□□ -1.87
CENPFP49454 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.37□□□□□ -1.87
CENPFP49454 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.37□□□□□ -1.87
CENPFP49454 AC026782.2-201ENST00000510845 636 ntBASIC3.37□□□□□ -1.87
CENPFP49454 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.37□□□□□ -1.87
CENPFP49454 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CENPFP49454 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.37□□□□□ -1.87
CENPFP49454 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CENPFP49454 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CENPFP49454 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.36□□□□□ -1.87
CENPFP49454 RPL21P109-201ENST00000422213 475 ntBASIC3.36□□□□□ -1.87
CENPFP49454 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.36□□□□□ -1.87
CENPFP49454 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CENPFP49454 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.36□□□□□ -1.87
CENPFP49454 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.36□□□□□ -1.87
CENPFP49454 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC3.36□□□□□ -1.87
CENPFP49454 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CENPFP49454 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CENPFP49454 SNORD74.4-201ENST00000364129 80 ntBASIC3.36□□□□□ -1.87
CENPFP49454 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CENPFP49454 MIR93-201ENST00000385024 80 ntBASIC3.36□□□□□ -1.87
CENPFP49454 MIR764-201ENST00000390811 85 ntBASIC3.36□□□□□ -1.87
CENPFP49454 AL591806.2-201ENST00000433122 173 ntBASIC3.36□□□□□ -1.87
CENPFP49454 AC083906.5-201ENST00000503722 328 ntBASIC3.36□□□□□ -1.87
CENPFP49454 RNA5SP154-201ENST00000516193 111 ntBASIC3.36□□□□□ -1.87
CENPFP49454 AC107016.2-201ENST00000547968 190 ntBASIC3.36□□□□□ -1.87
CENPFP49454 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.36□□□□□ -1.87
CENPFP49454 SNORD53-201ENST00000579969 78 ntBASIC3.36□□□□□ -1.87
CENPFP49454 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.36□□□□□ -1.87
CENPFP49454 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CENPFP49454 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.36□□□□□ -1.87
CENPFP49454 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CENPFP49454 Y_RNA.40-201ENST00000362645 93 ntBASIC3.36□□□□□ -1.87
CENPFP49454 RNU2-52P-201ENST00000410680 190 ntBASIC3.36□□□□□ -1.87
CENPFP49454 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CENPFP49454 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.36□□□□□ -1.87
CENPFP49454 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CENPFP49454 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.36□□□□□ -1.87
CENPFP49454 OR7A8P-201ENST00000595427 913 ntBASIC3.36□□□□□ -1.87
CENPFP49454 AL139395.1-201ENST00000603662 160 ntBASIC3.36□□□□□ -1.87
CENPFP49454 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CENPFP49454 RHOT1P2-201ENST00000366423 333 ntBASIC3.35□□□□□ -1.87
CENPFP49454 HLFP1-201ENST00000402375 499 ntBASIC3.35□□□□□ -1.87
CENPFP49454 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPFP49454 AC002075.2-201ENST00000425207 252 ntBASIC3.35□□□□□ -1.87
CENPFP49454 AL445528.1-201ENST00000426330 420 ntBASIC3.35□□□□□ -1.87
CENPFP49454 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC3.35□□□□□ -1.87
CENPFP49454 SKP1P1-201ENST00000438081 489 ntBASIC3.35□□□□□ -1.87
CENPFP49454 RPL23AP23-201ENST00000452590 471 ntBASIC3.35□□□□□ -1.87
CENPFP49454 AC099560.2-201ENST00000457554 255 ntBASIC3.35□□□□□ -1.87
CENPFP49454 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPFP49454 AC233702.9-201ENST00000581528 203 ntBASIC3.35□□□□□ -1.87
CENPFP49454 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CENPFP49454 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CENPFP49454 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.35□□□□□ -1.87
CENPFP49454 AC008837.1-201ENST00000511513 412 ntBASIC3.35□□□□□ -1.87
CENPFP49454 OR5AP1P-201ENST00000529730 940 ntBASIC3.35□□□□□ -1.87
CENPFP49454 AL392112.1-201ENST00000605115 829 ntBASIC3.35□□□□□ -1.87
CENPFP49454 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms