Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC099676.1-201ENST00000608886 657 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AL391261.4-201ENST00000616012 481 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 U7.8-201ENST00000619968 63 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC068831.8-201ENST00000620171 435 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 U6.98-201ENST00000637157 84 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSNK1A1P48729 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSNK1A1P48729 AL157700.1-201ENST00000561973 1432 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.32□□□□□ -1.88
CSNK1A1P48729 AC024560.2-201ENST00000507981 1497 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 ZNF90P1-201ENST00000480493 1951 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AF127577.6-201ENST00000623352 2191 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 AP001148.1-201ENST00000624124 2359 ntBASIC3.32□□□□□ -1.88
CSNK1A1P48729 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSNK1A1P48729 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSNK1A1P48729 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSNK1A1P48729 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSNK1A1P48729 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSNK1A1P48729 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 ATP5F1P4-201ENST00000397288 746 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 HSPE1P26-201ENST00000405341 275 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 RN7SKP156-201ENST00000410308 342 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 AL357078.2-201ENST00000416486 427 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 RPS15AP40-201ENST00000419621 391 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 NIPA2P1-201ENST00000426223 976 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 FO393419.3-201ENST00000428741 282 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 MTCO3P16-201ENST00000454456 754 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CSNK1A1P48729 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 RN7SKP277-201ENST00000516895 283 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 MTND5P21-201ENST00000531961 522 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 AC025260.1-201ENST00000548858 430 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 HSPE1P5-201ENST00000561489 272 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 AL021368.1-201ENST00000607490 540 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 AC024941.1-201ENST00000612250 334 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 MIR1264-201ENST00000616374 69 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.31□□□□□ -1.88
CSNK1A1P48729 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSNK1A1P48729 AC116096.1-201ENST00000566804 2314 ntBASIC3.31□□□□□ -1.88
CSNK1A1P48729 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSNK1A1P48729 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSNK1A1P48729 RAD1P1-201ENST00000231383 813 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 HMGB1P10-201ENST00000395823 563 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 SNORA57.3-201ENST00000411095 141 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 HMGB3P20-201ENST00000417997 600 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 PSMA2P3-201ENST00000429685 675 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 USP9YP31-201ENST00000431405 881 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AL513321.1-201ENST00000441175 761 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC097499.1-201ENST00000444277 208 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 BX276092.4-201ENST00000452056 248 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC099563.1-201ENST00000456086 418 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 RPL31P13-201ENST00000484151 370 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CSNK1A1P48729 NPM1P41-201ENST00000512920 831 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CSNK1A1P48729 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC093853.1-201ENST00000515689 483 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 RN7SKP83-201ENST00000516512 178 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 OR7E13P-201ENST00000526052 910 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 OR5D17P-201ENST00000531492 978 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 MIR5047-201ENST00000579212 100 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC090616.5-202ENST00000582111 297 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC079610.2-201ENST00000604818 690 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AL359535.1-201ENST00000612100 1087 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CSNK1A1P48729 CEP170P1-201ENST00000502249 4587 ntBASIC3.3□□□□□ -1.88
CSNK1A1P48729 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CSNK1A1P48729 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CSNK1A1P48729 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms