Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM4SF4P48230 RPL21P67-201ENST00000402896 478 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC073264.1-201ENST00000411508 416 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 RAB9AP3-201ENST00000412737 573 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC004987.3-201ENST00000413879 771 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 TIMM9P2-201ENST00000419324 266 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 MTND1P32-201ENST00000433043 938 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.04□□□□□ -1.6
TM4SF4P48230 RPL35AP21-201ENST00000437667 333 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AL354941.1-201ENST00000438600 464 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 CYCSP24-201ENST00000445119 316 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 RAB9AP1-201ENST00000449393 573 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 TRBV26-201ENST00000456572 344 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 OR4G11P-201ENST00000492842 939 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 RN7SL812P-201ENST00000493791 279 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AL592156.1-201ENST00000508758 304 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.04□□□□□ -1.6
TM4SF4P48230 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.04□□□□□ -1.6
TM4SF4P48230 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.04□□□□□ -1.6
TM4SF4P48230 RNA5SP519-201ENST00000516480 119 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.04□□□□□ -1.6
TM4SF4P48230 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.04□□□□□ -1.6
TM4SF4P48230 AC068993.1-201ENST00000546724 589 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC008127.2-201ENST00000549925 1075 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.04□□□□□ -1.6
TM4SF4P48230 AC006349.1-201ENST00000555526 235 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 TRAV15-201ENST00000556680 249 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC006539.2-201ENST00000601729 572 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC025811.1-201ENST00000604312 472 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AL592221.1-201ENST00000605266 382 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC006270.3-201ENST00000605967 1036 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 Z99129.2-201ENST00000619967 314 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AP003485.2-201ENST00000623636 610 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AP000648.2-201ENST00000624182 404 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AC092184.1-201ENST00000625042 715 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.04□□□□□ -1.6
TM4SF4P48230 AL596275.2-204ENST00000641628 552 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 AL596275.2-206ENST00000641957 626 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM4SF4P48230 AL390862.1-201ENST00000635467 1469 ntBASIC5.04□□□□□ -1.6
TM4SF4P48230 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.04□□□□□ -1.6
TM4SF4P48230 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TM4SF4P48230 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.03□□□□□ -1.6
TM4SF4P48230 Z95327.2-201ENST00000414579 1873 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 IL6STP1-201ENST00000346911 1020 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 RNU6-1243P-201ENST00000364028 107 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 AL583835.1-201ENST00000399570 407 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 RNA5SP36-201ENST00000410197 133 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 RNU6-757P-201ENST00000410334 100 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 LUZP4P1-201ENST00000415420 344 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF4P48230 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.03□□□□□ -1.6
TM4SF4P48230 PSMA2P3-201ENST00000429685 675 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TM4SF4P48230 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF4P48230 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF4P48230 RPS4XP12-201ENST00000461747 709 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.03□□□□□ -1.6
TM4SF4P48230 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF4P48230 AC104057.1-201ENST00000515547 497 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 RN7SKP31-201ENST00000516354 278 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 RNA5SP73-201ENST00000516744 108 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.03□□□□□ -1.6
TM4SF4P48230 MTND2P26-201ENST00000528255 1029 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 CYCSP28-201ENST00000534284 321 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.03□□□□□ -1.6
TM4SF4P48230 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF4P48230 AC090502.2-201ENST00000549267 280 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 AC090888.2-201ENST00000559765 1144 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 AL512347.1-201ENST00000566420 503 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 AC002400.1-201ENST00000569310 726 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 SNORD39.3-201ENST00000584451 71 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 AC007566.2-201ENST00000603642 413 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TM4SF4P48230 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 MIR4496-201ENST00000635896 61 ntBASIC5.03□□□□□ -1.6
TM4SF4P48230 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.03□□□□□ -1.6
TM4SF4P48230 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TM4SF4P48230 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
TM4SF4P48230 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TM4SF4P48230 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TM4SF4P48230 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.61
TM4SF4P48230 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.61
TM4SF4P48230 ZNF33CP-201ENST00000432492 2030 ntBASIC5.02□□□□□ -1.61
TM4SF4P48230 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF4P48230 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.02□□□□□ -1.61
TM4SF4P48230 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
TM4SF4P48230 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF4P48230 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TM4SF4P48230 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF4P48230 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TM4SF4P48230 RNU6-621P-201ENST00000364752 109 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms