Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.95□□□□□ -1.78
BRCC3P46736 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 UBE2V1P11-201ENST00000411559 285 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.95□□□□□ -1.78
BRCC3P46736 JKAMPP1-201ENST00000413804 919 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 VTA1P1-201ENST00000414044 866 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.95□□□□□ -1.78
BRCC3P46736 AL606495.1-201ENST00000422100 813 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 FO393414.1-201ENST00000428697 1184 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 HSFY7P-201ENST00000432672 318 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 HSFY8P-201ENST00000437934 318 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.95□□□□□ -1.78
BRCC3P46736 HSFY5P-201ENST00000453726 309 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC104687.1-201ENST00000485829 412 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC005726.1-201ENST00000494679 427 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
BRCC3P46736 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 AC008802.1-201ENST00000519121 791 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 DUXAP2-201ENST00000519198 589 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
BRCC3P46736 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.95□□□□□ -1.78
BRCC3P46736 OR5AK3P-201ENST00000527486 1297 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.95□□□□□ -1.78
BRCC3P46736 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.95□□□□□ -1.78
BRCC3P46736 AC104229.1-201ENST00000561364 255 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC006960.3-201ENST00000561845 705 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.95□□□□□ -1.78
BRCC3P46736 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.95□□□□□ -1.78
BRCC3P46736 MIR3944-201ENST00000581277 108 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.95□□□□□ -1.78
BRCC3P46736 BNIP3P31-201ENST00000604515 566 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC012468.1-201ENST00000604888 430 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.95□□□□□ -1.78
BRCC3P46736 AC103858.2-201ENST00000621471 543 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 AL357559.1-201ENST00000622228 274 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
BRCC3P46736 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCC3P46736 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCC3P46736 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BRCC3P46736 AL353743.4-201ENST00000422653 1547 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 OR11H5P-202ENST00000641612 1325 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 SNORD9-201ENST00000362566 104 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 MIR142-201ENST00000384835 87 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 RPL22P22-201ENST00000395439 379 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 BX664727.1-201ENST00000416024 466 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 AC245054.1-201ENST00000420944 258 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.94□□□□□ -1.78
BRCC3P46736 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.94□□□□□ -1.78
BRCC3P46736 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.94□□□□□ -1.78
BRCC3P46736 EXTL2P1-201ENST00000446218 416 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 AC010374.2-201ENST00000512933 535 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 MTCO3P27-201ENST00000514397 196 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.94□□□□□ -1.78
BRCC3P46736 OR5B10P-201ENST00000532869 642 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.94□□□□□ -1.78
BRCC3P46736 AC025260.1-201ENST00000548858 430 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 MIR4512-201ENST00000583257 77 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 AC012254.4-201ENST00000588843 273 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 AL390816.3-201ENST00000604527 1066 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 U3.45-201ENST00000607547 219 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 AC019176.2-201ENST00000611579 315 ntBASIC3.94□□□□□ -1.78
BRCC3P46736 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
BRCC3P46736 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
BRCC3P46736 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
BRCC3P46736 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRCC3P46736 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 AL049555.1-201ENST00000562834 1933 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC027287.1-201ENST00000553115 1453 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.93□□□□□ -1.78
BRCC3P46736 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.93□□□□□ -1.78
BRCC3P46736 AC017007.4-201ENST00000503353 1352 ntBASIC3.93□□□□□ -1.78
BRCC3P46736 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRCC3P46736 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms