Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.7□□□□□ -1.82
NKX2-1P43699 RNA5SP92-201ENST00000516437 110 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-1P43699 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-1P43699 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.7□□□□□ -1.82
NKX2-1P43699 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX2-1P43699 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AC090502.2-201ENST00000549267 280 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.7□□□□□ -1.82
NKX2-1P43699 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.7□□□□□ -1.82
NKX2-1P43699 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-1P43699 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.7□□□□□ -1.82
NKX2-1P43699 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX2-1P43699 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AL009028.1-201ENST00000604895 802 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AL031666.3-201ENST00000609320 1006 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 AC093799.2-201ENST00000610062 578 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 AP000894.4-201ENST00000610185 483 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 AC078899.5-201ENST00000612475 178 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 EIF3FP1-201ENST00000613970 806 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 MIR6886-201ENST00000619864 61 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 AC131159.1-201ENST00000621854 213 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX2-1P43699 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.7□□□□□ -1.82
NKX2-1P43699 LINC01739-205ENST00000641890 573 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 NCLP2-201ENST00000416078 1462 ntBASIC3.7□□□□□ -1.82
NKX2-1P43699 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX2-1P43699 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-1P43699 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NKX2-1P43699 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-1P43699 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.7□□□□□ -1.82
NKX2-1P43699 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NKX2-1P43699 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX2-1P43699 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NKX2-1P43699 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 AL390862.1-201ENST00000635467 1469 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 MTND4P26-201ENST00000415971 1359 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
NKX2-1P43699 Y_RNA.311-201ENST00000365068 96 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 RN7SKP269-201ENST00000365545 319 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 SNORA51.6-201ENST00000384151 125 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 RN7SKP229-201ENST00000410465 302 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 RN7SKP273-201ENST00000411392 314 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 OR8G2P-201ENST00000412796 908 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.69□□□□□ -1.82
NKX2-1P43699 RPS12P23-201ENST00000419579 400 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-1P43699 PRELID3BP10-201ENST00000431957 584 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 LYPLA1P1-201ENST00000434514 622 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 RPL23AP33-201ENST00000442301 452 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AL590399.6-201ENST00000446396 307 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AC104978.1-201ENST00000449387 391 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 SLC31A1P1-201ENST00000451221 567 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-1P43699 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.69□□□□□ -1.82
NKX2-1P43699 AC083829.1-201ENST00000503756 657 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AC004980.4-201ENST00000513375 203 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-1P43699 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.69□□□□□ -1.82
NKX2-1P43699 RNU4-60P-201ENST00000517239 135 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX2-1P43699 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX2-1P43699 OR4G1P-201ENST00000588632 938 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AC004987.4-201ENST00000603383 338 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 YWHAQP7-201ENST00000603536 658 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AC010680.3-201ENST00000604215 520 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AC114878.2-201ENST00000604863 1251 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AL391358.1-201ENST00000605342 190 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AL159169.3-201ENST00000608871 561 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AP001521.1-201ENST00000609150 300 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-1P43699 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-1P43699 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX2-1P43699 AF001550.2-201ENST00000636643 217 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AC007671.2-201ENST00000637344 619 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 ZNF734P-201ENST00000419494 1534 ntBASIC3.69□□□□□ -1.82
NKX2-1P43699 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.69□□□□□ -1.82
NKX2-1P43699 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.69□□□□□ -1.82
NKX2-1P43699 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NKX2-1P43699 MAPK10-263ENST00000641052 4307 ntBASIC3.68□□□□□ -1.82
NKX2-1P43699 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-1P43699 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.68□□□□□ -1.82
NKX2-1P43699 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms