Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC093755.1-201ENST00000512950 1023 ntBASIC3.63□□□□□ -1.83
RORAP35398 RNU6-1231P-201ENST00000517185 103 ntBASIC3.63□□□□□ -1.83
RORAP35398 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.63□□□□□ -1.83
RORAP35398 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.63□□□□□ -1.83
RORAP35398 OR5D17P-201ENST00000531492 978 ntBASIC3.63□□□□□ -1.83
RORAP35398 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.63□□□□□ -1.83
RORAP35398 MIR5187-201ENST00000583479 76 ntBASIC3.63□□□□□ -1.83
RORAP35398 BNIP3P22-201ENST00000593399 556 ntBASIC3.63□□□□□ -1.83
RORAP35398 AC113194.1-201ENST00000606037 500 ntBASIC3.63□□□□□ -1.83
RORAP35398 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.63□□□□□ -1.83
RORAP35398 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.63□□□□□ -1.83
RORAP35398 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.63□□□□□ -1.83
RORAP35398 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RORAP35398 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
RORAP35398 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RORAP35398 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RORAP35398 RAD1P1-201ENST00000231383 813 ntBASIC3.62□□□□□ -1.83
RORAP35398 SNORA31-201ENST00000362607 130 ntBASIC3.62□□□□□ -1.83
RORAP35398 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.62□□□□□ -1.83
RORAP35398 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RORAP35398 SNORA5A-201ENST00000384111 134 ntBASIC3.62□□□□□ -1.83
RORAP35398 AC007066.1-201ENST00000392902 381 ntBASIC3.62□□□□□ -1.83
RORAP35398 SYF2P2-201ENST00000417620 583 ntBASIC3.62□□□□□ -1.83
RORAP35398 LINC01347-201ENST00000417964 355 ntBASIC3.62□□□□□ -1.83
RORAP35398 TCEA1P2-201ENST00000420496 906 ntBASIC3.62□□□□□ -1.83
RORAP35398 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.62□□□□□ -1.83
RORAP35398 AL139247.1-201ENST00000422768 325 ntBASIC3.62□□□□□ -1.83
RORAP35398 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.62□□□□□ -1.83
RORAP35398 AL390879.2-203ENST00000426943 1121 ntBASIC3.62□□□□□ -1.83
RORAP35398 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.62□□□□□ -1.83
RORAP35398 AL050321.1-201ENST00000432363 400 ntBASIC3.62□□□□□ -1.83
RORAP35398 MTCO3P43-201ENST00000440974 771 ntBASIC3.62□□□□□ -1.83
RORAP35398 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RORAP35398 RPL6P5-201ENST00000445678 828 ntBASIC3.62□□□□□ -1.83
RORAP35398 RPL29P29-201ENST00000448725 423 ntBASIC3.62□□□□□ -1.83
RORAP35398 RPS17P13-201ENST00000448974 407 ntBASIC3.62□□□□□ -1.83
RORAP35398 MTND2P6-201ENST00000455337 1030 ntBASIC3.62□□□□□ -1.83
RORAP35398 AC096992.1-201ENST00000459808 709 ntBASIC3.62□□□□□ -1.83
RORAP35398 CABYRP1-201ENST00000465493 1045 ntBASIC3.62□□□□□ -1.83
RORAP35398 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.62□□□□□ -1.83
RORAP35398 AC093663.2-201ENST00000484625 313 ntBASIC3.62□□□□□ -1.83
RORAP35398 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.62□□□□□ -1.83
RORAP35398 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.62□□□□□ -1.83
RORAP35398 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.62□□□□□ -1.83
RORAP35398 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.62□□□□□ -1.83
RORAP35398 OR8L1P-201ENST00000534005 955 ntBASIC3.62□□□□□ -1.83
RORAP35398 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.62□□□□□ -1.83
RORAP35398 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.62□□□□□ -1.83
RORAP35398 ZNF192P1-203ENST00000565888 810 ntBASIC3.62□□□□□ -1.83
RORAP35398 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.62□□□□□ -1.83
RORAP35398 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.62□□□□□ -1.83
RORAP35398 AC012467.1-201ENST00000607740 256 ntBASIC3.62□□□□□ -1.83
RORAP35398 AL391497.1-201ENST00000608671 547 ntBASIC3.62□□□□□ -1.83
RORAP35398 MIR4496-201ENST00000635896 61 ntBASIC3.62□□□□□ -1.83
RORAP35398 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RORAP35398 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RORAP35398 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.62□□□□□ -1.83
RORAP35398 ZNF90P1-201ENST00000480493 1951 ntBASIC3.62□□□□□ -1.83
RORAP35398 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RORAP35398 UBE3AP2-201ENST00000429033 2259 ntBASIC3.61□□□□□ -1.83
RORAP35398 AL049737.1-201ENST00000413920 1403 ntBASIC3.61□□□□□ -1.83
RORAP35398 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 AC000367.1-201ENST00000452711 1766 ntBASIC3.61□□□□□ -1.83
RORAP35398 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.61□□□□□ -1.83
RORAP35398 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 RNU6-98P-201ENST00000384173 107 ntBASIC3.61□□□□□ -1.83
RORAP35398 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RORAP35398 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RORAP35398 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 HMGB1P13-201ENST00000406019 642 ntBASIC3.61□□□□□ -1.83
RORAP35398 RNA5SP44-201ENST00000410446 133 ntBASIC3.61□□□□□ -1.83
RORAP35398 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.61□□□□□ -1.83
RORAP35398 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.61□□□□□ -1.83
RORAP35398 AC069157.1-201ENST00000421749 137 ntBASIC3.61□□□□□ -1.83
RORAP35398 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.61□□□□□ -1.83
RORAP35398 ATP5HP2-201ENST00000433885 485 ntBASIC3.61□□□□□ -1.83
RORAP35398 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.61□□□□□ -1.83
RORAP35398 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.61□□□□□ -1.83
RORAP35398 AL500527.1-201ENST00000448532 255 ntBASIC3.61□□□□□ -1.83
RORAP35398 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.61□□□□□ -1.83
RORAP35398 RPL7P47-201ENST00000497299 556 ntBASIC3.61□□□□□ -1.83
RORAP35398 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.61□□□□□ -1.83
RORAP35398 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.61□□□□□ -1.83
RORAP35398 AC021146.1-201ENST00000511202 716 ntBASIC3.61□□□□□ -1.83
RORAP35398 RN7SKP157-201ENST00000516174 282 ntBASIC3.61□□□□□ -1.83
RORAP35398 RNU4-60P-201ENST00000517239 135 ntBASIC3.61□□□□□ -1.83
RORAP35398 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.61□□□□□ -1.83
RORAP35398 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RORAP35398 POLR2KP1-201ENST00000553226 168 ntBASIC3.61□□□□□ -1.83
RORAP35398 GTF2IP22-201ENST00000554443 182 ntBASIC3.61□□□□□ -1.83
RORAP35398 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.61□□□□□ -1.83
RORAP35398 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.61□□□□□ -1.83
RORAP35398 AL731537.2-201ENST00000561565 951 ntBASIC3.61□□□□□ -1.83
RORAP35398 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.61□□□□□ -1.83
RORAP35398 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.61□□□□□ -1.83
RORAP35398 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
RORAP35398 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms