Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.76□□□□□ -1.65
CIITAP33076 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.76□□□□□ -1.65
CIITAP33076 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CIITAP33076 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CIITAP33076 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CIITAP33076 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CIITAP33076 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CIITAP33076 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 RNU4-72P-201ENST00000410754 173 ntBASIC4.75□□□□□ -1.65
CIITAP33076 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.75□□□□□ -1.65
CIITAP33076 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 AL031736.2-201ENST00000426573 787 ntBASIC4.75□□□□□ -1.65
CIITAP33076 UBE2D3P1-201ENST00000436669 444 ntBASIC4.75□□□□□ -1.65
CIITAP33076 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.75□□□□□ -1.65
CIITAP33076 MRPL42P4-201ENST00000453267 443 ntBASIC4.75□□□□□ -1.65
CIITAP33076 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.75□□□□□ -1.65
CIITAP33076 AC011979.1-201ENST00000472300 483 ntBASIC4.75□□□□□ -1.65
CIITAP33076 RPS29P19-201ENST00000479709 171 ntBASIC4.75□□□□□ -1.65
CIITAP33076 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.75□□□□□ -1.65
CIITAP33076 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.75□□□□□ -1.65
CIITAP33076 RNU6-416P-201ENST00000516265 103 ntBASIC4.75□□□□□ -1.65
CIITAP33076 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.75□□□□□ -1.65
CIITAP33076 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.75□□□□□ -1.65
CIITAP33076 DYNLL1P4-201ENST00000549314 266 ntBASIC4.75□□□□□ -1.65
CIITAP33076 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.75□□□□□ -1.65
CIITAP33076 AADACP1-206ENST00000561502 1193 ntBASIC4.75□□□□□ -1.65
CIITAP33076 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.75□□□□□ -1.65
CIITAP33076 AC135628.1-201ENST00000568867 534 ntBASIC4.75□□□□□ -1.65
CIITAP33076 MIR4666A-201ENST00000580160 79 ntBASIC4.75□□□□□ -1.65
CIITAP33076 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.75□□□□□ -1.65
CIITAP33076 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.75□□□□□ -1.65
CIITAP33076 AC080013.3-201ENST00000606839 578 ntBASIC4.75□□□□□ -1.65
CIITAP33076 AC139792.2-201ENST00000624218 587 ntBASIC4.75□□□□□ -1.65
CIITAP33076 AC007671.2-201ENST00000637344 619 ntBASIC4.75□□□□□ -1.65
CIITAP33076 ZNF663P-202ENST00000641770 1131 ntBASIC4.75□□□□□ -1.65
CIITAP33076 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 AL049555.1-201ENST00000562834 1933 ntBASIC4.75□□□□□ -1.65
CIITAP33076 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.75□□□□□ -1.65
CIITAP33076 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.75□□□□□ -1.65
CIITAP33076 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CIITAP33076 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CIITAP33076 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CIITAP33076 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CIITAP33076 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
CIITAP33076 AL121657.1-201ENST00000327215 531 ntBASIC4.74□□□□□ -1.65
CIITAP33076 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CIITAP33076 RNU1-94P-201ENST00000362627 173 ntBASIC4.74□□□□□ -1.65
CIITAP33076 MIR1302-8-201ENST00000408342 128 ntBASIC4.74□□□□□ -1.65
CIITAP33076 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CIITAP33076 OR8G2P-201ENST00000412796 908 ntBASIC4.74□□□□□ -1.65
CIITAP33076 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.74□□□□□ -1.65
CIITAP33076 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.74□□□□□ -1.65
CIITAP33076 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.74□□□□□ -1.65
CIITAP33076 AC011233.1-201ENST00000422812 283 ntBASIC4.74□□□□□ -1.65
CIITAP33076 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.74□□□□□ -1.65
CIITAP33076 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.74□□□□□ -1.65
CIITAP33076 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.74□□□□□ -1.65
CIITAP33076 AC007327.1-201ENST00000447461 264 ntBASIC4.74□□□□□ -1.65
CIITAP33076 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.74□□□□□ -1.65
CIITAP33076 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.74□□□□□ -1.65
CIITAP33076 TPTE2P5-203ENST00000458118 728 ntBASIC4.74□□□□□ -1.65
CIITAP33076 AC104108.1-201ENST00000509930 412 ntBASIC4.74□□□□□ -1.65
CIITAP33076 SNORA31.9-201ENST00000516429 84 ntBASIC4.74□□□□□ -1.65
CIITAP33076 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.74□□□□□ -1.65
CIITAP33076 AC023632.1-201ENST00000518463 375 ntBASIC4.74□□□□□ -1.65
CIITAP33076 MTCO1P47-201ENST00000523889 1271 ntBASIC4.74□□□□□ -1.65
CIITAP33076 AC092747.2-201ENST00000545069 983 ntBASIC4.74□□□□□ -1.65
CIITAP33076 AC125611.1-201ENST00000549563 229 ntBASIC4.74□□□□□ -1.65
CIITAP33076 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.74□□□□□ -1.65
CIITAP33076 AC044913.1-201ENST00000557200 430 ntBASIC4.74□□□□□ -1.65
CIITAP33076 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.74□□□□□ -1.65
CIITAP33076 EIF1P6-201ENST00000600054 334 ntBASIC4.74□□□□□ -1.65
CIITAP33076 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.74□□□□□ -1.65
CIITAP33076 AP005137.2-201ENST00000609238 400 ntBASIC4.74□□□□□ -1.65
CIITAP33076 MIR7154-201ENST00000620673 73 ntBASIC4.74□□□□□ -1.65
CIITAP33076 AC007490.1-201ENST00000624321 703 ntBASIC4.74□□□□□ -1.65
CIITAP33076 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CIITAP33076 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CIITAP33076 MTCO1P6-201ENST00000481192 1384 ntBASIC4.74□□□□□ -1.65
CIITAP33076 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CIITAP33076 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CIITAP33076 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CIITAP33076 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CIITAP33076 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CIITAP33076 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CIITAP33076 NACA3P-201ENST00000359690 648 ntBASIC4.73□□□□□ -1.65
CIITAP33076 Y_RNA.318-201ENST00000365131 97 ntBASIC4.73□□□□□ -1.65
CIITAP33076 RNU6-157P-201ENST00000383957 107 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms