Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CASC19-264ENST00000641912 1184 ntBASIC4.81□□□□□ -1.64
CD40P25942 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40P25942 AL359893.1-201ENST00000447628 1580 ntBASIC4.81□□□□□ -1.64
CD40P25942 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40P25942 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40P25942 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD40P25942 AC011460.1-201ENST00000636268 1834 ntBASIC4.81□□□□□ -1.64
CD40P25942 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40P25942 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CD40P25942 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CD40P25942 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CD40P25942 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40P25942 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40P25942 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD40P25942 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CD40P25942 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD40P25942 AL138820.1-201ENST00000617901 5305 ntBASIC4.8□□□□□ -1.64
CD40P25942 Y_RNA.295-201ENST00000364918 102 ntBASIC4.8□□□□□ -1.64
CD40P25942 RNU6-359P-201ENST00000365466 108 ntBASIC4.8□□□□□ -1.64
CD40P25942 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD40P25942 RNU6-483P-201ENST00000384088 108 ntBASIC4.8□□□□□ -1.64
CD40P25942 RNU6-339P-201ENST00000384310 107 ntBASIC4.8□□□□□ -1.64
CD40P25942 Y_RNA.573-201ENST00000384763 105 ntBASIC4.8□□□□□ -1.64
CD40P25942 SNORA68.2-201ENST00000391263 128 ntBASIC4.8□□□□□ -1.64
CD40P25942 AL049693.1-201ENST00000402760 611 ntBASIC4.8□□□□□ -1.64
CD40P25942 AC096921.1-201ENST00000411661 375 ntBASIC4.8□□□□□ -1.64
CD40P25942 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD40P25942 RPSAP35-201ENST00000413753 818 ntBASIC4.8□□□□□ -1.64
CD40P25942 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40P25942 HMGB3P20-201ENST00000417997 600 ntBASIC4.8□□□□□ -1.64
CD40P25942 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40P25942 SLC35E1P1-201ENST00000419313 864 ntBASIC4.8□□□□□ -1.64
CD40P25942 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD40P25942 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40P25942 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.8□□□□□ -1.64
CD40P25942 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.8□□□□□ -1.64
CD40P25942 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40P25942 AL671855.1-201ENST00000446875 1203 ntBASIC4.8□□□□□ -1.64
CD40P25942 AL353691.1-201ENST00000451332 387 ntBASIC4.8□□□□□ -1.64
CD40P25942 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40P25942 AC011225.1-201ENST00000457751 369 ntBASIC4.8□□□□□ -1.64
CD40P25942 MTND1P35-201ENST00000526739 508 ntBASIC4.8□□□□□ -1.64
CD40P25942 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40P25942 AC137627.1-201ENST00000545761 289 ntBASIC4.8□□□□□ -1.64
CD40P25942 SETP2-201ENST00000553886 926 ntBASIC4.8□□□□□ -1.64
CD40P25942 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40P25942 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40P25942 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.8□□□□□ -1.64
CD40P25942 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.8□□□□□ -1.64
CD40P25942 AC025678.1-201ENST00000567861 338 ntBASIC4.8□□□□□ -1.64
CD40P25942 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40P25942 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD40P25942 AC017083.3-201ENST00000609955 700 ntBASIC4.8□□□□□ -1.64
CD40P25942 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.8□□□□□ -1.64
CD40P25942 AL590099.1-201ENST00000615276 138 ntBASIC4.8□□□□□ -1.64
CD40P25942 AC091925.2-201ENST00000625059 256 ntBASIC4.8□□□□□ -1.64
CD40P25942 MIR4496-201ENST00000635896 61 ntBASIC4.8□□□□□ -1.64
CD40P25942 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
CD40P25942 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CD40P25942 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CD40P25942 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
CD40P25942 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CD40P25942 AC025470.1-201ENST00000510053 2032 ntBASIC4.8□□□□□ -1.64
CD40P25942 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD40P25942 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 IQCB2P-201ENST00000401788 1633 ntBASIC4.79□□□□□ -1.64
CD40P25942 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.79□□□□□ -1.64
CD40P25942 OR55B1P-203ENST00000641518 2602 ntBASIC4.79□□□□□ -1.64
CD40P25942 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 AC090971.4-201ENST00000560291 1800 ntBASIC4.79□□□□□ -1.64
CD40P25942 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 AC123769.1-201ENST00000530992 3192 ntBASIC4.79□□□□□ -1.64
CD40P25942 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 AL121886.1-201ENST00000358609 435 ntBASIC4.79□□□□□ -1.64
CD40P25942 Y_RNA.89-201ENST00000363031 102 ntBASIC4.79□□□□□ -1.64
CD40P25942 Y_RNA.159-201ENST00000363674 87 ntBASIC4.79□□□□□ -1.64
CD40P25942 RNU6-534P-201ENST00000364877 106 ntBASIC4.79□□□□□ -1.64
CD40P25942 RNU6-456P-201ENST00000384493 107 ntBASIC4.79□□□□□ -1.64
CD40P25942 AC005042.1-201ENST00000393397 800 ntBASIC4.79□□□□□ -1.64
CD40P25942 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.79□□□□□ -1.64
CD40P25942 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 RPS3AP24-201ENST00000407896 734 ntBASIC4.79□□□□□ -1.64
CD40P25942 MIR1286-201ENST00000408112 78 ntBASIC4.79□□□□□ -1.64
CD40P25942 MIR1178-201ENST00000408396 91 ntBASIC4.79□□□□□ -1.64
CD40P25942 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.79□□□□□ -1.64
CD40P25942 AL139413.1-201ENST00000421309 217 ntBASIC4.79□□□□□ -1.64
CD40P25942 AL353193.1-201ENST00000421444 268 ntBASIC4.79□□□□□ -1.64
CD40P25942 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.79□□□□□ -1.64
CD40P25942 KRT8P51-201ENST00000438938 274 ntBASIC4.79□□□□□ -1.64
CD40P25942 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 AL163193.1-201ENST00000444895 788 ntBASIC4.79□□□□□ -1.64
CD40P25942 PTMAP3-201ENST00000447474 330 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms