Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBCP0CG48 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UBCP0CG48 ZNF37BP-203ENST00000452306 1352 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBCP0CG48 RNU6-600P-201ENST00000362524 99 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBCP0CG48 RNU6-883P-201ENST00000384597 107 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
UBCP0CG48 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.3□□□□□ -1.88
UBCP0CG48 UBE2V1P11-201ENST00000411559 285 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.3□□□□□ -1.88
UBCP0CG48 TATDN1P1-201ENST00000414123 891 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 RPL26P29-201ENST00000415623 438 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 LIPT1P1-201ENST00000415870 1186 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.3□□□□□ -1.88
UBCP0CG48 RPS15AP6-201ENST00000420703 385 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC005189.1-201ENST00000431286 310 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.3□□□□□ -1.88
UBCP0CG48 AC073143.1-201ENST00000436316 395 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 SETP5-201ENST00000437270 562 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 FABP5P3-201ENST00000437960 408 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.3□□□□□ -1.88
UBCP0CG48 UBE2V1P5-201ENST00000440070 405 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.3□□□□□ -1.88
UBCP0CG48 MTND2P6-201ENST00000455337 1030 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC099563.1-201ENST00000456086 418 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 RN7SL459P-201ENST00000481078 302 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.3□□□□□ -1.88
UBCP0CG48 RAC1P2-201ENST00000511164 579 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 RNA5SP208-201ENST00000516156 78 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 RN7SKP244-201ENST00000516513 307 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC103833.1-201ENST00000517442 172 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC034205.1-201ENST00000520621 638 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.3□□□□□ -1.88
UBCP0CG48 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.3□□□□□ -1.88
UBCP0CG48 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.3□□□□□ -1.88
UBCP0CG48 CR383656.6-201ENST00000550518 394 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.3□□□□□ -1.88
UBCP0CG48 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
UBCP0CG48 AL389895.1-201ENST00000554127 252 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 CKS1BP1-201ENST00000555221 240 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 MIR4504-201ENST00000577413 92 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC023575.1-201ENST00000580510 358 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.3□□□□□ -1.88
UBCP0CG48 KLKP1-201ENST00000595979 403 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.3□□□□□ -1.88
UBCP0CG48 AC008687.2-201ENST00000597865 520 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC104785.1-201ENST00000603220 588 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC006254.3-201ENST00000603353 884 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AL163642.2-201ENST00000604722 1019 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
UBCP0CG48 AC112200.1-201ENST00000625015 234 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC092184.1-201ENST00000625042 715 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.3□□□□□ -1.88
UBCP0CG48 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.3□□□□□ -1.88
UBCP0CG48 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
UBCP0CG48 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBCP0CG48 SEC63P2-201ENST00000503863 1939 ntBASIC3.3□□□□□ -1.88
UBCP0CG48 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBCP0CG48 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.3□□□□□ -1.88
UBCP0CG48 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.29□□□□□ -1.88
UBCP0CG48 MTCO1P18-201ENST00000455518 1419 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.29□□□□□ -1.88
UBCP0CG48 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBCP0CG48 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBCP0CG48 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
UBCP0CG48 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UBCP0CG48 RNA5SP424-201ENST00000390988 115 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.29□□□□□ -1.88
UBCP0CG48 AL022722.2-201ENST00000402519 180 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AL391417.1-201ENST00000404100 426 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AL138880.1-201ENST00000405824 642 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 SNORA57.3-201ENST00000411095 141 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AL049610.1-201ENST00000423374 372 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 PNRC2P1-201ENST00000423940 420 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.29□□□□□ -1.88
UBCP0CG48 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.29□□□□□ -1.88
UBCP0CG48 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.29□□□□□ -1.88
UBCP0CG48 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.29□□□□□ -1.88
UBCP0CG48 Z74696.2-201ENST00000436514 498 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 HMGB1P12-201ENST00000438594 598 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AC007000.2-201ENST00000442564 487 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 RPS26P56-201ENST00000444468 240 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AC006326.1-201ENST00000445465 787 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.29□□□□□ -1.88
UBCP0CG48 VN1R17P-201ENST00000472048 1090 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 RPS4XP13-201ENST00000483219 789 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.29□□□□□ -1.88
UBCP0CG48 RPL23AP55-201ENST00000498163 452 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.29□□□□□ -1.88
UBCP0CG48 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.29□□□□□ -1.88
UBCP0CG48 SNORA31.9-201ENST00000516429 84 ntBASIC3.29□□□□□ -1.88
UBCP0CG48 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.29□□□□□ -1.88
UBCP0CG48 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.29□□□□□ -1.88
UBCP0CG48 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.29□□□□□ -1.88
UBCP0CG48 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.29□□□□□ -1.88
UBCP0CG48 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.29□□□□□ -1.88
UBCP0CG48 AC006960.3-201ENST00000561845 705 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms